Gene Strop_2933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2933 
Symbol 
ID5059397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3354992 
End bp3355501 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content70% 
IMG OID640475184 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001159749 
Protein GI145595452 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0253991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACT CAGATCCGAC CCGTGGCCCT GCCATCCGGC CTGCCGCCGC CGATGACGCG 
GCGGCTGTCG CGGCGGTCTA CGTGCGGAGC TGGCGTGCCG CCTATGCGGA ACTCCTGCCC
AAGGAGGTGT TGGCGTCCCT GGACGAGGCG GACTGGGCTC GGCGTTTCCG TAGCCGGTGG
GACCCGGCCC GGTGCACGCT TCTGGCGTTC ACCCCGGGTC GCGTCATCGG CGTGGCAATG
GCCGGGCCGG ACCGTCAGGA TCCGCTGCTC GCCGAGATCT ACGCGATCTA CGTGCTGCCG
AGTGTCCAGG GCCAGGGGGT CGGCGCGGCC CTGCTGGACG CCGCCATCGC CCACCTCGAC
GCACCGCTGG TCCGGCTGTG GTGCGCCGCG GCGAACAACG GCTCCCGAAG GTTCTACGAG
AGTCAAGGGT TCGCGCTGGA CGGTGCTACC GGCAGCTACG AGATCAGCGG TCACCGCCTG
GCTACCGTCC GCTACGTCTG CCCGAGGTAG
 
Protein sequence
MNDSDPTRGP AIRPAAADDA AAVAAVYVRS WRAAYAELLP KEVLASLDEA DWARRFRSRW 
DPARCTLLAF TPGRVIGVAM AGPDRQDPLL AEIYAIYVLP SVQGQGVGAA LLDAAIAHLD
APLVRLWCAA ANNGSRRFYE SQGFALDGAT GSYEISGHRL ATVRYVCPR