Gene Strop_2932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2932 
Symbol 
ID5059396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3353524 
End bp3354789 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content66% 
IMG OID640475183 
Producthypothetical protein 
Protein accessionYP_001159748 
Protein GI145595451 
COG category[S] Function unknown 
COG ID[COG4325] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0142508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGT GGGCGAAGTT CTTCCGAATC CGCCAGAACC TGGTGGGGAG CCTGTGGTTC 
TTCCCGCTGC TGGGGCTGGT GGTGGGGGTT CTGCTCGCCC TCGTGGTCCG CGAGCTTGAC
GCCGTCATCA CCCTGCCGTC GGCGTGGGAG TTCGAGCCGT CCGCGGCGCA GGAACTCCTC
ACGATCGTGG TTGAGGTCGC CGGAGTGTTG GCCGGATTTG TGGTGGCCGT AAGCGTGGTC
GTGCTCGAAC TCCATGCCGA CAGTTTTCCC CGCTACCTGC GGCTGTTGTA CCGAGACCGA
TTCCACCTGG CCGTCGTGAC GTTCATCCTC GGCACCGTCT CCTTCGCGTT CACACTTCTG
GCGATCGGCG GGTCCGCGGA GACTCCGCAG CTTGGTGCCG GTATCGCGGG GATCTTCCTC
ATCGTGAGCT TCGTGCTCTT CGTGGTCTTC CTCAACCACC TGGTTCATCA ACTACGGCCG
GTGGCGGTCG CGGCCGACGT GACCAAGACC GCCCGGAAGC TGATGTCGGC AGGCGACCAG
TCGGGCGGGT CGGTGGTGAC CGAGGAGGAG TCGGCCGGGG AACCAACTCT GGTGATTGAG
GCCCAACGAT CCGGGTCGGT GCAGGCGTTG AATGAGGAAG CCCTGGTCCG CTGGGCGAGC
CAGCACGGCT GTCGGCTGCG ATCGAAAGTG GCGGCCGGCG ACTATGTCAT CACCGGGCAA
CCAGTGATGG AGGTATTCGG AACGAGGCCA TCGGCTGACT CCACCGGCCA GATCCACGCC
ATGGTGGCCA TGGGGACCGA GCGGACCATC GAGCGGGATC CTGCGTATGC GGTACGGATT
CTGGTGGACA GTGCGGCACG GGCGCTCTCC CCGGCCATCA ATGATCCGAC AACAGCGGTT
CAGATGCTGG ACTACGTGGA GGAGCTGCTC CGGATGATCG GAGTAAAGCC CCTCGGCATG
ATGAGGTACT GCGACGAATC CGGCCAGTCA CGGCTGATCG TGCCCGGGCG GACGTGGGAG
AACTACCTCA CCCTGGCGGT CACGGAGATC CGCGAGTACG GCGCCGACTC CGTCCAGGTG
ATGCGGCGGC TCCGCGCCAT GCTCGAAGAC CTTCGCGAGG TGCTTCCGGC CGACCGGCGA
CCGGCGGTGG ACGCCGAGCT TGACCGGCTC GACCAGACCC TGGCCGCGAG CTTCGGGGGC
AAGGTCGACC ACGACCGGGC CGCGGCGTCG GACCGGCAGG GAATCGGCGG TCCAGGGCGG
GGATGA
 
Protein sequence
MMLWAKFFRI RQNLVGSLWF FPLLGLVVGV LLALVVRELD AVITLPSAWE FEPSAAQELL 
TIVVEVAGVL AGFVVAVSVV VLELHADSFP RYLRLLYRDR FHLAVVTFIL GTVSFAFTLL
AIGGSAETPQ LGAGIAGIFL IVSFVLFVVF LNHLVHQLRP VAVAADVTKT ARKLMSAGDQ
SGGSVVTEEE SAGEPTLVIE AQRSGSVQAL NEEALVRWAS QHGCRLRSKV AAGDYVITGQ
PVMEVFGTRP SADSTGQIHA MVAMGTERTI ERDPAYAVRI LVDSAARALS PAINDPTTAV
QMLDYVEELL RMIGVKPLGM MRYCDESGQS RLIVPGRTWE NYLTLAVTEI REYGADSVQV
MRRLRAMLED LREVLPADRR PAVDAELDRL DQTLAASFGG KVDHDRAAAS DRQGIGGPGR
G