Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2926 |
Symbol | |
ID | 5059390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3346132 |
End bp | 3347682 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640475177 |
Product | major facilitator transporter |
Protein accession | YP_001159742 |
Protein GI | 145595445 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.102472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTCTC GGTCCCGCCG GTCATCGCCG TCCCGACGGG CCGCCCTGAT CAGCCTCTGC ACCGCCGCCA CACTGGTGTG GCTCGCGTTC TCCAACCTTG GGGTGGCACT GCCGACCATC GCCAACGAGT TGAACGTCAA CCTGACCGAT ATGCAGTGGG CGAACAACGC CTTGAGTATC GCCTGCGGAA CACTCCTGCT GGCCGGCGGT CGCCTCACCG ACCTGTACGG CCACCGAAAG ATGCTGCTGC TCGGCCTGCT GATCTTCGGC GTCGCCGCCC TGGCGACTGC CTTCGCTCCC AACCTCGCCG GCCTGGTCGC CGGCCGTGCG GTGATGGGCG TCGGTAGCGC CCTCATCCTG CCCGCCACGC TGGCGATGAT CCCGGCGCTC TTCGAGCGCG CCGAGCAGCC ACCAGCCTTC GCCGCATGGG CGGCGGCGAC CTGGGCCGGG CAGGCGATCG GGCCGGCTGT CGGTGGAACC CTGACCACCC TGCTCGGCTG GCGGTCGCTG TTCTGGTTGA CCGCACCGGT GGTCCTCGTC TTGTACGTCG TGACCAAACG GAACGCACCC GAGGCACAGC AGGGCCGGGG ACGGATCGAC CTGATCGGGT TGGTCACCGG GGCCGGGGCC GTACTGTGCC TGCTCTTCGC GCTGACCGAG GGGCAGCAGG CCGGTTTCAA CGATCCGCTG ATCATTGCTC TCTTCGGCGC CACCGTGGTG TTCGCCGCGG CGTTCGTGCT CGTCGAGTTG AGGATCACCG ACCCGCTGGT AGATCTACGG CTGTTCCGCA CCCGCAGCTT TGACGGCGCT CTCATCGTCA ACCTGACGAT GAACATGTCC TTCGCCGGCA CGCTTTTCGT GCTGTCTCTC TACCTGCAGG ACGTCCGGGG CTACAGCGCG TTCGTGGCCG GCCTGCTCCT GGTTCCGGCC GCCGGAACGA TCCTGGTGTT CAACTCCGTC GGCGCACGGG TCGTCACCCG ACACGACGCC CGCTCCCCCT CGGTCTGGGG CCTCGTCCTG GTCGGCGTCG GCTGCTTCGC CATCAGCGCC CTCCTACCCT CCCTGTCGGT AGTCGCGGTG ATCGTGGGCC TACTCATCAT CGGTGTCGGA CTGGGCCTGC TCTCCGTGCC CGTGGCTGAC ACCATCGTCG GGGGCCCACC GCCCGCCCTC GCCGGCACCG CGTCCGGGGT CTACAAGACC AGCAGCATGC TGGGGGGCGC GCTCGGTGTC GTCCTGCTGA CCGCCGCAAC CACCCGATTC GGCCGGGCCG AGGCGGCCCC GGTGAGCACC GCGGCCGGGC TCACCGAAAA CGAGTCAAAC CAGGTCGTCA ACGCGCTGAC CAACTCCCAG ACGGCGAACG CCATCCTCGA CAAGCTGCCG GCGAACGAGC GGAGCCTCGT GATCGATGCC TACCACCAGG CCTTCTCGGA CGGGGTGTCG ACGGCCCTCG TACTCGGTGG TGTGATCGCG GTGATCGGCG CGGTGCTGGC CGGCTGGATC TGGCCCCGCC ACCGAAAGGG CCGCGACACG CGGCAACCCC AGCAGGGTTG A
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Protein sequence | MHSRSRRSSP SRRAALISLC TAATLVWLAF SNLGVALPTI ANELNVNLTD MQWANNALSI ACGTLLLAGG RLTDLYGHRK MLLLGLLIFG VAALATAFAP NLAGLVAGRA VMGVGSALIL PATLAMIPAL FERAEQPPAF AAWAAATWAG QAIGPAVGGT LTTLLGWRSL FWLTAPVVLV LYVVTKRNAP EAQQGRGRID LIGLVTGAGA VLCLLFALTE GQQAGFNDPL IIALFGATVV FAAAFVLVEL RITDPLVDLR LFRTRSFDGA LIVNLTMNMS FAGTLFVLSL YLQDVRGYSA FVAGLLLVPA AGTILVFNSV GARVVTRHDA RSPSVWGLVL VGVGCFAISA LLPSLSVVAV IVGLLIIGVG LGLLSVPVAD TIVGGPPPAL AGTASGVYKT SSMLGGALGV VLLTAATTRF GRAEAAPVST AAGLTENESN QVVNALTNSQ TANAILDKLP ANERSLVIDA YHQAFSDGVS TALVLGGVIA VIGAVLAGWI WPRHRKGRDT RQPQQG
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