| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2921 |
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| Symbol | |
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| ID | 5059385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3341006 |
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| End bp | 3342463 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640475172 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001159737 |
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| Protein GI | 145595440 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.797495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGG GTGAGCTGGG CGCGGGGGAG GCGCCCCGGA CGGGGTCAGG GCGACCGGTC
CGACCCTGGT CGGCGGCGAC CGTCGGTCTG TTGACAGTGT TTCTGGGCGG GTTGAACATC
TCCCTGCTCG TGATCGCTTT GCCGACGATC CGAAGTGTGT TCGACCTGAG CCCGAGCGCT
CAGCAATGGC TGGTATCCGG CTACTTTCTT ACGTTCGGAC TGACGCTGGT GCCCGCCGGC
CGGTTCGGTG ACCAGCGTGG ACGGCGCAAC GTCTTTGTCA GCGGCATCAC GTTGTTCGTG
GTGGCGAGCA TGGTTGCGGG ATTCGCCCCC TCCGGCAAGT GGCTGATCGT GGCTCGGTTG
GCGCAGGGAG CCGGCGTCGG CATAGCGCTA CCCCAGGTGT TCGGGACGGT CCAGCGGATG
TTCTCGCCCC GAGCCCGCGG GCGCCCGCTC GGACTGTTGG CCGCCGGAGT CAGTAGCTCG
CGAATGGCTG GCCCGATACT CGGCGGCGCA CTGGTTGCCG TCGGCGGCGA ACAGGGCTGG
CGGTGGATCT TTTTGATCAA TGTTCCGATT GGGGTACTCG TCGCTGTCTT CGGGTGGCGG
TTGTTCCCCG TCGCCGAGCG GGGGCAGCGA TCCGACCTGG ACCTGGTCGG CGCTCTCCTG
CTGATGTGTG GGTTGGGCCT GCTGTGGCTG ATGCAGGGCG ATCAGTGGCC GGGGCTGCTC
CGCTGGCTGC TCCTGCCGGC CGGCATCGCG ATGCTGGTTG CCTTTGTCCG CTGGGAGCGC
TCCTATAGCC GCCGCGGTGA GCCGATATTC AACCTGAACC TGTTCCGGAT CCGGTCGTTC
GCCCTGGGCG CATTCATTGC CACGTTCTAC TTCGCCGGCT ACGACGCGAT CTTCTACCTC
ATGTCGGAGT ACCTACAGCA AGGGCTCGGA CACGACGAGT TGGTGGCGGG TATCGCTCTC
ATGCCGTTGG CTCTGGGCAC GGTCGTCGGC TCGGTGGCCG CGGGCGCCAA GGCCGGACAG
GTGGGGCGGC CACTGATCAC GGCGGGGCTG GCCTTCGCGG CGGTCGGGCT CGGCATACTG
TTGGTCGCCG ACCTGTTCCT ACCAGGTCCA CAATCCCCGC ACGCGGCCAC CCTGCCACTA
CTTCTGGCCG GTCTGGGCGG CGGACTAGTC ACCGCGGGCG TCGGCGGCGG GCTGGTCATC
GCGCCGAACC AGACTCTGGC CCTGTCACAC GTACCACCCG CCGAGGGCGG TAGCGCCGGG
GGGATGCTCC AGATGGGGCA ACGCTTCGGT GGTGGGATGG GGGTCGCCGT CATCGGTACC
GCGCTCTTCA CCAGCCTGGA CAGAACCGGT GACTGGCTCC TCGCCTTCCG AATTCCGATG
GCGATCATTA TCAGCTTCCT CGTCATCGCG TTTGTCGCTG CTCTGATCGA TATGGTTTCT
CGATCTCGCC TGCGGTGA
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| Protein sequence | MSEGELGAGE APRTGSGRPV RPWSAATVGL LTVFLGGLNI SLLVIALPTI RSVFDLSPSA
QQWLVSGYFL TFGLTLVPAG RFGDQRGRRN VFVSGITLFV VASMVAGFAP SGKWLIVARL
AQGAGVGIAL PQVFGTVQRM FSPRARGRPL GLLAAGVSSS RMAGPILGGA LVAVGGEQGW
RWIFLINVPI GVLVAVFGWR LFPVAERGQR SDLDLVGALL LMCGLGLLWL MQGDQWPGLL
RWLLLPAGIA MLVAFVRWER SYSRRGEPIF NLNLFRIRSF ALGAFIATFY FAGYDAIFYL
MSEYLQQGLG HDELVAGIAL MPLALGTVVG SVAAGAKAGQ VGRPLITAGL AFAAVGLGIL
LVADLFLPGP QSPHAATLPL LLAGLGGGLV TAGVGGGLVI APNQTLALSH VPPAEGGSAG
GMLQMGQRFG GGMGVAVIGT ALFTSLDRTG DWLLAFRIPM AIIISFLVIA FVAALIDMVS
RSRLR
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