Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2917 |
Symbol | |
ID | 5059381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3335905 |
End bp | 3336783 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640475168 |
Product | hypothetical protein |
Protein accession | YP_001159733 |
Protein GI | 145595436 |
COG category | [S] Function unknown |
COG ID | [COG3342] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTTTCT CCCTCGTCGC CCGCTCCGCC GACGGCCGAC TGCACGGAGT CGTCGTGGCC AGCCGGTTCC TCGCCGCCGG GGCGCTGGTG CCGGCCGCGG AGGCCGAGGT GGGCGCGATC GCCACCCAGG CGCACGTGAA CCTGGCCTAC CGGCCGCAGG GCTTGGCGCT GCTACGGACC GGGGTTGGCG CGGCGGGCGT AGTCGCCGGA CTCGTGGCCG CCGACGACGA ACGCGACCAC CGCCAGCTCG GTGTCGTGGG GGCGACCGGC CCGGGTGCCT GCTGGACCGG GCCGGCCTGT CGCGCCTGGG CGGGCGGGCA GTCCGGGGAC GGCTGGGCTG CGCAGGGCAA CATTCTCGCC GGTCCGCATG TAATCGACGA GGTCCGCGAC GGCTGGCTCG GTGGCCTGGG GCTACCGTTC CCACAGCGGC TCCTGGCCGC GCTGCGCGCT GGGGACGAGG CGGGTGGGGA CCGGCGCGGG CGGCAGAGTG CCGGGCTGTT GGTCGTCGAG CGGGGCGCCG GGTACGCCGG CACCGGTGAC ACCCTGATCG ATCTGCGGGT CGACGACCAC CCGGATCCGG TCGCCGAGTT GGGCCGGCTC CTCGCCACAC ACACTCGACT GTTCAGCCGC CCCGACCCGG GCACCCTGTT GACTCTCACC GGAACGCTCG CGGTCGAGGT GGCGGGTCTG CTCACCGCGC TCGGGCACCC CGCCGATCCG GCCGCTCCGC AGGAGGCGCT GGTCGCTTGG GCGGGCCTGG AGAATCTGGA GCGGCGACTG GTACCGGGCC GGATCGACCC GGTCGTGCTG GAGCAGCTGC GCCGGGCCGC CCCGCACGTT CCCGCGCCCC GCGCTGCCGG CACCCCGCCC GCGTCCTGA
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Protein sequence | MTFSLVARSA DGRLHGVVVA SRFLAAGALV PAAEAEVGAI ATQAHVNLAY RPQGLALLRT GVGAAGVVAG LVAADDERDH RQLGVVGATG PGACWTGPAC RAWAGGQSGD GWAAQGNILA GPHVIDEVRD GWLGGLGLPF PQRLLAALRA GDEAGGDRRG RQSAGLLVVE RGAGYAGTGD TLIDLRVDDH PDPVAELGRL LATHTRLFSR PDPGTLLTLT GTLAVEVAGL LTALGHPADP AAPQEALVAW AGLENLERRL VPGRIDPVVL EQLRRAAPHV PAPRAAGTPP AS
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