Gene Strop_2917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2917 
Symbol 
ID5059381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3335905 
End bp3336783 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content76% 
IMG OID640475168 
Producthypothetical protein 
Protein accessionYP_001159733 
Protein GI145595436 
COG category[S] Function unknown 
COG ID[COG3342] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTTTCT CCCTCGTCGC CCGCTCCGCC GACGGCCGAC TGCACGGAGT CGTCGTGGCC 
AGCCGGTTCC TCGCCGCCGG GGCGCTGGTG CCGGCCGCGG AGGCCGAGGT GGGCGCGATC
GCCACCCAGG CGCACGTGAA CCTGGCCTAC CGGCCGCAGG GCTTGGCGCT GCTACGGACC
GGGGTTGGCG CGGCGGGCGT AGTCGCCGGA CTCGTGGCCG CCGACGACGA ACGCGACCAC
CGCCAGCTCG GTGTCGTGGG GGCGACCGGC CCGGGTGCCT GCTGGACCGG GCCGGCCTGT
CGCGCCTGGG CGGGCGGGCA GTCCGGGGAC GGCTGGGCTG CGCAGGGCAA CATTCTCGCC
GGTCCGCATG TAATCGACGA GGTCCGCGAC GGCTGGCTCG GTGGCCTGGG GCTACCGTTC
CCACAGCGGC TCCTGGCCGC GCTGCGCGCT GGGGACGAGG CGGGTGGGGA CCGGCGCGGG
CGGCAGAGTG CCGGGCTGTT GGTCGTCGAG CGGGGCGCCG GGTACGCCGG CACCGGTGAC
ACCCTGATCG ATCTGCGGGT CGACGACCAC CCGGATCCGG TCGCCGAGTT GGGCCGGCTC
CTCGCCACAC ACACTCGACT GTTCAGCCGC CCCGACCCGG GCACCCTGTT GACTCTCACC
GGAACGCTCG CGGTCGAGGT GGCGGGTCTG CTCACCGCGC TCGGGCACCC CGCCGATCCG
GCCGCTCCGC AGGAGGCGCT GGTCGCTTGG GCGGGCCTGG AGAATCTGGA GCGGCGACTG
GTACCGGGCC GGATCGACCC GGTCGTGCTG GAGCAGCTGC GCCGGGCCGC CCCGCACGTT
CCCGCGCCCC GCGCTGCCGG CACCCCGCCC GCGTCCTGA
 
Protein sequence
MTFSLVARSA DGRLHGVVVA SRFLAAGALV PAAEAEVGAI ATQAHVNLAY RPQGLALLRT 
GVGAAGVVAG LVAADDERDH RQLGVVGATG PGACWTGPAC RAWAGGQSGD GWAAQGNILA
GPHVIDEVRD GWLGGLGLPF PQRLLAALRA GDEAGGDRRG RQSAGLLVVE RGAGYAGTGD
TLIDLRVDDH PDPVAELGRL LATHTRLFSR PDPGTLLTLT GTLAVEVAGL LTALGHPADP
AAPQEALVAW AGLENLERRL VPGRIDPVVL EQLRRAAPHV PAPRAAGTPP AS