Gene Strop_2913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2913 
Symbol 
ID5059377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3330570 
End bp3331733 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content75% 
IMG OID640475164 
Producthypothetical protein 
Protein accessionYP_001159729 
Protein GI145595432 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.509906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGGTCA CCGCCCGGGG GATCGGGTTG TTTGTCGCTG CCGCTGCCCT GCTGGCGGCG 
GGCTTCCGGT TCGCGTACCC GGAGTTGGCG CTGCTGGGCG CGGCGGGGGC GACCGCGGGC
GGCTACGCGT TGGCCGTTGC CGCGTGGCGG CCCCGGTTGG CGGTGGTCCG CCGGGCCGAG
CCGGATCGGG TGGGGCGCGG TGAGCCGGCG ACGATGACGG TGACCGTGCA CAACAGTGGC
CGGCTTCGGT CGGCGAACCT GGTCGCCGAG GACCGCTGTG GTGGGGTGCC GGTGCCGGTG
CCGGTGTTGC GGCTGCGACC GGGGAAGGAC ACCACGGCCC GGTACGACGT GCCGACGACT
CGCCGGGGTG TGGTGCCGGT GGGGCCGCTA CGGGTGACCC GGCGTGACCC GCTGGGTCTG
GTGTCGCTGT CGCGCCCGTA CGGCGAGACG GTGCCGGTGT GGGTACATCC GCGGGTCCAT
CCGCTGTCCG TGGTGCCCAC CGGCGCGGGG CGCAGCCTGG ACGGCCGGGT GGATTCCGTC
CCGCATGGTT CGATCACCTT CGACTCACTG CGGGAGTACG TGGTCGGGGA CGAGCTGCGC
CGGGTGCACT GGCGGACCAG CGCGCGGGTG GGGGAGCTGA TGGTCCGGGA GAACGTGGAC
ACCAGCCTGC CTCGCCTGGT CGTGTTGCTG GACAACCGGG CGGTGGCTCA TCCACAGCGG
GTCGCCGGTC TGGCGGAGTC GTTCGAGGCG GCGTGTGAGG CGGCGGCGTC GGTGCTGACC
GCCGCGTACC GGGCCGACCT GCCGGTGGTG CTGGTGCTGG TGGCCTCGGA GGAGGCGGTC
AGCCCGGCGG GTGCGCCGGA TTCCGAGGTG GTGGGCCCGC TGGACCGGCT CGCGGCGGCG
GGACTCGGTG CCGACACCCT TGACGCCATG CTGACCCGGC TGCGGGGGGA CCGCCTCGGC
GACACGCTGA TCGCGCTCAC TGGCCCGGGC GGGCGGGAGA CGCTCGGCCG GTTCGGTGCG
CTGCGCGGCG CGTACCCGTC GGTGGTCGTC GGGGTTTTCG GGGCGGCGGA GCCGGCACAG
CCGCCGGCAA CCGGCATGGT GGTGATCGAC GCGGCGGACG GGGCCGCGTT CGCCGCCGAG
TGGGATCGAG TGCGGCGATG GTGA
 
Protein sequence
MGVTARGIGL FVAAAALLAA GFRFAYPELA LLGAAGATAG GYALAVAAWR PRLAVVRRAE 
PDRVGRGEPA TMTVTVHNSG RLRSANLVAE DRCGGVPVPV PVLRLRPGKD TTARYDVPTT
RRGVVPVGPL RVTRRDPLGL VSLSRPYGET VPVWVHPRVH PLSVVPTGAG RSLDGRVDSV
PHGSITFDSL REYVVGDELR RVHWRTSARV GELMVRENVD TSLPRLVVLL DNRAVAHPQR
VAGLAESFEA ACEAAASVLT AAYRADLPVV LVLVASEEAV SPAGAPDSEV VGPLDRLAAA
GLGADTLDAM LTRLRGDRLG DTLIALTGPG GRETLGRFGA LRGAYPSVVV GVFGAAEPAQ
PPATGMVVID AADGAAFAAE WDRVRRW