| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2880 |
|---|
| Symbol | |
|---|
| ID | 5059343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 3292997 |
|---|
| End bp | 3294130 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640475132 |
|---|
| Product | VWA containing CoxE family protein |
|---|
| Protein accession | YP_001159698 |
|---|
| Protein GI | 145595401 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.191674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.189706 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGATC CCGAACTGGA ACGGTGGCGG CTCGTGCTCG GTGAGCCCGG CGACGCCGCC
CTTGGCCGCC GACCGCTCGC GGCCGAGACC GCGGCCCGCG ACGCCGCGCT CGAATGGCTG
TACGGCCGTG ACGAGGAACT CGGTCGCCGG GGCGTACGCC GCGCCGGCGG CCGGTACGGC
GGTGACGGTC CCGCGACGCT GACCACAGTC GACTGGCTCG ACGACATCAG CCGACTCTTC
CCCCGCGACA CCATCGAACG ACTGCAACGC GACGCGGTGG AGCGGTACGA GATCCACGAC
ATCGTGACCG ACCCCGCCGT CCTGGAACGC GTGGAGCCCA ACCAATCCAT GCTCAGAGCG
GTGCTGCGCA CGAAGCACCT GATGAACCCG CAGGTCCTGC GGCTAGCCCG GCGCATCGTC
GAAGCGGTCA TCCGCCAACT CATGGACAAG CTGGCGACCG AGGTACGGGT GGCGTTCACC
GGCGCACGGG CCCGGCGGCC GAGCCGGTTC CGGCAGGCAC GCAACTTCGA CGTCCGGCGC
ACCATCAAAG ACAACCTCGG CCACTACCGG CCCGAAGACC AGCGGCTGTT CATCGAGACG
CCCTACTTCT TCTCGCGCAT CCGCCAGCAC ATCGACCAGT GGCAGGTGAT CCTGCTCGTT
GACCAGTCCG GGTCGATGAC CGACTCGGTC ATCCACTCCG CGGTCACCGC CGCCTGCCTG
TGGGGACTGC CCGGCGTCCG CACCCACCTG GTCGCGTTCG ACACTGACAT CGTCGACCTG
ACCAGCGATG TCGACGACCC GGTCGAGCTG CTGATGAAGG TCCAGCTCGG TGGTGGCACC
AATATCGGCC GCGCGGTCGA CTACGCCGCG CAGCTCATCG AGCAGCCCCG GCGGTCCATC
GTCGCGCTGA TCACGGATTT CTACGAGGGC GGATCGGAGG AGCGGCTCGT GCGGACCGTC
CGCGGCCTGG TCGAGCAGGG CACCAAGGTG CTCGGGCTGG CCGCGCTCGA CGAACAGGCC
AACCCGGTGT ACGACCGCGT GGCCGCGCAA CGCCTCGCCG ACGTCGGCGC GTCCGTCGGC
GCGATGACAC CGGGCGAGCT TGCCACGTTC GTCGCCGAGC AGGTGGGCCG ATGA
|
|---|
| Protein sequence | MTDPELERWR LVLGEPGDAA LGRRPLAAET AARDAALEWL YGRDEELGRR GVRRAGGRYG
GDGPATLTTV DWLDDISRLF PRDTIERLQR DAVERYEIHD IVTDPAVLER VEPNQSMLRA
VLRTKHLMNP QVLRLARRIV EAVIRQLMDK LATEVRVAFT GARARRPSRF RQARNFDVRR
TIKDNLGHYR PEDQRLFIET PYFFSRIRQH IDQWQVILLV DQSGSMTDSV IHSAVTAACL
WGLPGVRTHL VAFDTDIVDL TSDVDDPVEL LMKVQLGGGT NIGRAVDYAA QLIEQPRRSI
VALITDFYEG GSEERLVRTV RGLVEQGTKV LGLAALDEQA NPVYDRVAAQ RLADVGASVG
AMTPGELATF VAEQVGR
|
|---|
| |