Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2878 |
Symbol | |
ID | 5059341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3289434 |
End bp | 3290528 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640475130 |
Product | hypothetical protein |
Protein accession | YP_001159696 |
Protein GI | 145595399 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.461679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.172876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCGC AACCGCCGTC GAAACGCTCG ACCCGCCCCC ACCTGTCGCG CCGCGTCGTA CTGACCGGTA GTTGTCTTGG TCTGCTCACC GCCGCCGGCG CCACGCTCTG GGGCGATCCG CCCTCAGCGG CCACGGTCAG CGATCCTGCG GTGGGCGCCA TCCCCGAGGA CCGGCTGCTA CGGCCGTGGG GACGGCTACC TGCCACGGCG CGCATCGGTA CCGGCATCAC GGTAGGGCCT ACCGGGGAGA TAGCTCTGCT GCACCGGGCG GGCACCGCGT TCGCCTACGA CGCGGTCATC GACACGGACA CGGTCGTCGT GCTGAACCCG CGCGACGGCA CGGTGCGCCA GACTTGGGGA GCGGGACGGT TTCGATCCCC TCACTCGATC ACCGCCGACA GTGAGGGACG GTATTGGGTC ACCGACGTCA GTACTAACAA GATCACCACG TTCGACGCGG CGGGACGGCA GGTCGGTGAA CTGGGCCACG ACTATCCCAC CGGACTGGAA ACCTGCCTTC GAGTACGTAA CGTCCTCAGC AACCTGCCGT GCACCCTCGA CGAGTACATC TTCGCCCGCC CCACCGACGT GGCCGTGTCG GCCGACGGGT CCATCGTCGT CGCCGATGGC TACCGCAACT CCCGAGTGGC CCGGTTCGAC ACGCACCGCG TGCTGACCGG CCAGTGGGGC GAACTCGGTG ACCAGCCCGC ACAGTTCAAC ATTCCGCATG GCGTGGCCCT GGACAGCAAT GGAGCTGTGT ACGTCGCCGA CCGGCGCAAC GCACGGGTGC AGGTCTTCAA TGCCGACGGG TCGGTGCGGC ACGTGTGGCA CAGCAGCGCC CTGGGCCGTC CTTACGACGT CGCGATCGGT CCAGACGACG CGGTCTACGT CCTCGACGGC GGAGATCTCC TGGATGAGAA CAACGGTGAG CAGCGCGGCT ACGTTTGCCG GCTGTCGACC ACCGGGCGGG TCACCCACCG GTGGGCGCTA GCTGATCAGC GCGCCAACCC CCACCAACTC GCCATCGGTG TCCGGGGGGA GATTTACGTG GCCGCTCTTG CCGGTGCGCC CCTGTGGCGA TGGGCTCCCC AGTGA
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Protein sequence | MSSQPPSKRS TRPHLSRRVV LTGSCLGLLT AAGATLWGDP PSAATVSDPA VGAIPEDRLL RPWGRLPATA RIGTGITVGP TGEIALLHRA GTAFAYDAVI DTDTVVVLNP RDGTVRQTWG AGRFRSPHSI TADSEGRYWV TDVSTNKITT FDAAGRQVGE LGHDYPTGLE TCLRVRNVLS NLPCTLDEYI FARPTDVAVS ADGSIVVADG YRNSRVARFD THRVLTGQWG ELGDQPAQFN IPHGVALDSN GAVYVADRRN ARVQVFNADG SVRHVWHSSA LGRPYDVAIG PDDAVYVLDG GDLLDENNGE QRGYVCRLST TGRVTHRWAL ADQRANPHQL AIGVRGEIYV AALAGAPLWR WAPQ
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