Gene Strop_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2873 
Symbol 
ID5059336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3285741 
End bp3286643 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content68% 
IMG OID640475125 
Productpeptidase S1 and S6, chymotrypsin/Hap 
Protein accessionYP_001159691 
Protein GI145595394 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0332194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.172876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAGAA GACAACTGTT GCGCGCGTTC GGCGCCGTGC TAGTGGCGGT GCTGGCAGCG 
GCCGGGGTGC AGATCGCCAC CGGTGCGCCG GCCGCCGCGG CCCGCACGGT CTACTACGAC
GCGAGCCGGG CTGACGAGTT CCGTACGAAC GTCGACCAAG CGGCCCAGGT CTGGAACAGT
TCGGTCGGCA ACGTACGGCC GGCCCCGCGC AGTCCGGGCA ATGCCACCAT CTACGTCGAC
GGCGGCTGGG CTGATGCCGA CATCACGCCG TTCGTGGTCG GCGGTCGGCC GGCGACCGAG
AACTACCCGT GGCTGGTCTA CACCTACGGC TGCACCGGCA CGTTGATCAA GTCGGACTGG
GTCGTCACAG CGCGGCACTG CCCGACACCG TCCTCGGTCC GTGTGGGCAG CGTCAACCGC
ACCAGCGGTG GCACGGTCGT CGGGGTTCGC CGCGCCGTCA ACCACCCCAC GATCGACGTC
AAGCTGCTGC AACTGTCCAA TGCGGTCTCG TACGCCCCGG CCCCGATCCC GACGACGTCC
GGTGAGGTCG GTACCGCTAC CCGGATCATC GGCTGGGGTC TGACCTGCCC GTTCCGGGGC
TGCGGTTCGA CGCCGACGGT CGCGCACGAA CTGGACACGT CGATCCTGTC GGACAACCGG
TGCATCGGCA TCAACGGTTC GTACGAGATC TGCACCAACA ACACGAACGG TGACTCGGGC
GCCTGCTACG GCGACTCGGG TGGCCCGCAG GTTCGTCAGA TCGACGGAGT GTGGCACGTG
GTCGGTGCCA CCAGCCGGTC GGGCAACAAC CACCCGATCT GTGCCACCGG TCCATCGATC
TACGGTGACC TGCCGTCGAT CCGTTCCTGG ATCGACACCC AGGTCGGCGG CCTCACCGCC
TGA
 
Protein sequence
MVRRQLLRAF GAVLVAVLAA AGVQIATGAP AAAARTVYYD ASRADEFRTN VDQAAQVWNS 
SVGNVRPAPR SPGNATIYVD GGWADADITP FVVGGRPATE NYPWLVYTYG CTGTLIKSDW
VVTARHCPTP SSVRVGSVNR TSGGTVVGVR RAVNHPTIDV KLLQLSNAVS YAPAPIPTTS
GEVGTATRII GWGLTCPFRG CGSTPTVAHE LDTSILSDNR CIGINGSYEI CTNNTNGDSG
ACYGDSGGPQ VRQIDGVWHV VGATSRSGNN HPICATGPSI YGDLPSIRSW IDTQVGGLTA