Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2867 |
Symbol | |
ID | 5059330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3279219 |
End bp | 3280469 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640475119 |
Product | hypothetical protein |
Protein accession | YP_001159685 |
Protein GI | 145595388 |
COG category | [S] Function unknown |
COG ID | [COG3864] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.139584 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0606475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCG ACCACGCCGG AACGCTGGAC CGGGACAAGC TCTTCACCGC CCGGCTGCAC GCGGCCCGGG TCCGGCCCTA CCTGGCGACG GCGCTGTTCG CCCTGCACGT GGTCGAGTCC CGGCGGGTAC CGACAATGGC CGTGGACCCG TACTGGCGGT GCTACGTCTC GCCCGCGTTC GTGGACCGAA CCCCCGTGGA GGAACTCGCC GGAGTGTGGG TTCATGAGGT CTCGCACCTG CTCCGCGACC ACCACGGGCG CGGCGACCGG GTCGCCCGGG AACGCGGGCT GACCGGGCCG GGGGAGCGGC TGCGGATGAA CATCGCCGCG GACTGTGAGA TCAACGACGA CGTCTTCGGC GACGGGCTGG CCCGCCCGGA AGGCGCGGTC GAGCCGAGCT CACTGCTGCT GCCGGAGGGA CAACTGATGG AGGACTACCT GCGGCAGTTC CGGCTTGGCC CGCGTGTCCA GCACCTGGCA TGGCTGGACT GCGGCAGCGG CGCCGACGGG CTGCAGCGGC AGTGGGACCT CGGACCCGAC GGCGCGCACG CGCTCAGCCC GCAGGAACGG GACGCGGTGC GGTTCCGGGC GGCCGAGGGC ATCACCGGCC GACCGGGGAA CGTCCCTCTG GGCTGGCGGC GGTGGGCGGA ACAGGTATTC CATCCACCGC AGCCGTGGCG GGAACTACTC GGAGCGGCGG TCCGTTCGGC GGTCTCCGCG CCCGGCATGG GCGAGGACTA CTCCTACGGC CGGCCGTCGC GACGCTCCGC CGGCATACCC GGGGTCGTCC TGCCGGCGCT GCGACGCCGA CCCCCGCGGG TCTGCGTCAT CATCGACACC TCCGGCTCGG TCAGCGACAC CGAACTCGGC AGCGCCCTGC TCGAGGTCGC CGCGATCACC CGGGCCGTGG GCGGCCGCCG TGACCTGGTC ACCGTCTTCC CATGCGACGC GGCGGCCCAC GTCGTCCGCC CACTGTGTCA GGCCGAGGGC ATTCCGCTGA TCGGAGGTGG GGGTACGGAT CTGCGCACGG GCTTCGCTCG CGCGCTTCGG CAGAGTCCAT GCCCGGACGT CATCGTTGTG CTGACCGACG GACAGACGCC CTGGCCGGCC TCACGGCCGC CCTCCCGAAC CGTCGTAGGG CTGTTCCACC GCGCGGCCCG GTGCCACGAG GACGACCCCG ACTACCGGTC GGACTCCCCG CCCGAGTGGG CGCGCGTGGT CACCATCGGA TCCGCTCCCA CCGCGCGGTG A
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Protein sequence | MSTDHAGTLD RDKLFTARLH AARVRPYLAT ALFALHVVES RRVPTMAVDP YWRCYVSPAF VDRTPVEELA GVWVHEVSHL LRDHHGRGDR VARERGLTGP GERLRMNIAA DCEINDDVFG DGLARPEGAV EPSSLLLPEG QLMEDYLRQF RLGPRVQHLA WLDCGSGADG LQRQWDLGPD GAHALSPQER DAVRFRAAEG ITGRPGNVPL GWRRWAEQVF HPPQPWRELL GAAVRSAVSA PGMGEDYSYG RPSRRSAGIP GVVLPALRRR PPRVCVIIDT SGSVSDTELG SALLEVAAIT RAVGGRRDLV TVFPCDAAAH VVRPLCQAEG IPLIGGGGTD LRTGFARALR QSPCPDVIVV LTDGQTPWPA SRPPSRTVVG LFHRAARCHE DDPDYRSDSP PEWARVVTIG SAPTAR
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