Gene Strop_2867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2867 
Symbol 
ID5059330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3279219 
End bp3280469 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content73% 
IMG OID640475119 
Producthypothetical protein 
Protein accessionYP_001159685 
Protein GI145595388 
COG category[S] Function unknown 
COG ID[COG3864] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.139584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0606475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG ACCACGCCGG AACGCTGGAC CGGGACAAGC TCTTCACCGC CCGGCTGCAC 
GCGGCCCGGG TCCGGCCCTA CCTGGCGACG GCGCTGTTCG CCCTGCACGT GGTCGAGTCC
CGGCGGGTAC CGACAATGGC CGTGGACCCG TACTGGCGGT GCTACGTCTC GCCCGCGTTC
GTGGACCGAA CCCCCGTGGA GGAACTCGCC GGAGTGTGGG TTCATGAGGT CTCGCACCTG
CTCCGCGACC ACCACGGGCG CGGCGACCGG GTCGCCCGGG AACGCGGGCT GACCGGGCCG
GGGGAGCGGC TGCGGATGAA CATCGCCGCG GACTGTGAGA TCAACGACGA CGTCTTCGGC
GACGGGCTGG CCCGCCCGGA AGGCGCGGTC GAGCCGAGCT CACTGCTGCT GCCGGAGGGA
CAACTGATGG AGGACTACCT GCGGCAGTTC CGGCTTGGCC CGCGTGTCCA GCACCTGGCA
TGGCTGGACT GCGGCAGCGG CGCCGACGGG CTGCAGCGGC AGTGGGACCT CGGACCCGAC
GGCGCGCACG CGCTCAGCCC GCAGGAACGG GACGCGGTGC GGTTCCGGGC GGCCGAGGGC
ATCACCGGCC GACCGGGGAA CGTCCCTCTG GGCTGGCGGC GGTGGGCGGA ACAGGTATTC
CATCCACCGC AGCCGTGGCG GGAACTACTC GGAGCGGCGG TCCGTTCGGC GGTCTCCGCG
CCCGGCATGG GCGAGGACTA CTCCTACGGC CGGCCGTCGC GACGCTCCGC CGGCATACCC
GGGGTCGTCC TGCCGGCGCT GCGACGCCGA CCCCCGCGGG TCTGCGTCAT CATCGACACC
TCCGGCTCGG TCAGCGACAC CGAACTCGGC AGCGCCCTGC TCGAGGTCGC CGCGATCACC
CGGGCCGTGG GCGGCCGCCG TGACCTGGTC ACCGTCTTCC CATGCGACGC GGCGGCCCAC
GTCGTCCGCC CACTGTGTCA GGCCGAGGGC ATTCCGCTGA TCGGAGGTGG GGGTACGGAT
CTGCGCACGG GCTTCGCTCG CGCGCTTCGG CAGAGTCCAT GCCCGGACGT CATCGTTGTG
CTGACCGACG GACAGACGCC CTGGCCGGCC TCACGGCCGC CCTCCCGAAC CGTCGTAGGG
CTGTTCCACC GCGCGGCCCG GTGCCACGAG GACGACCCCG ACTACCGGTC GGACTCCCCG
CCCGAGTGGG CGCGCGTGGT CACCATCGGA TCCGCTCCCA CCGCGCGGTG A
 
Protein sequence
MSTDHAGTLD RDKLFTARLH AARVRPYLAT ALFALHVVES RRVPTMAVDP YWRCYVSPAF 
VDRTPVEELA GVWVHEVSHL LRDHHGRGDR VARERGLTGP GERLRMNIAA DCEINDDVFG
DGLARPEGAV EPSSLLLPEG QLMEDYLRQF RLGPRVQHLA WLDCGSGADG LQRQWDLGPD
GAHALSPQER DAVRFRAAEG ITGRPGNVPL GWRRWAEQVF HPPQPWRELL GAAVRSAVSA
PGMGEDYSYG RPSRRSAGIP GVVLPALRRR PPRVCVIIDT SGSVSDTELG SALLEVAAIT
RAVGGRRDLV TVFPCDAAAH VVRPLCQAEG IPLIGGGGTD LRTGFARALR QSPCPDVIVV
LTDGQTPWPA SRPPSRTVVG LFHRAARCHE DDPDYRSDSP PEWARVVTIG SAPTAR