| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2804 |
|---|
| Symbol | |
|---|
| ID | 5059267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3204734 |
|---|
| End bp | 3206128 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640475057 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001159623 |
|---|
| Protein GI | 145595326 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCC CGCCACTGAC CACACCGGCC ACCGACGAAC AGCAGGTGCT CTGGCTCGAC
CGGCTCCCCG TCGAGCAGCG CCTTCCCCGC CCACCACTGG ACGGTGACAC CACCGCCGAC
GTCGCCGTCG TCGGCGCCGG CTACACCGGT CTGTGGACCG CGTACTACCT GACCACCTTC
CGCCCCGAGC TGTCCGTGGT CGTGATCGAC GCCGGTCGGG CCGGCTTCGG CGCCTCCGGC
CGCAACGGTG GCTGGTGCAC CGCGGAGATG CCGGCGCTGC TGACGAGTCT GGTCCGTCGA
CACGGACCGA TGGCCGCGGT GCGGCTGTAC CGGGCCGGCC AGCGCTCCCT CGACGAGATC
CACCGGGTGC TCACCGACGA GGGGATCGAC GCGCACTGGC GGCACGACGG CTCGCTGTAC
GTGGCCCGTA GTGCCCCGCA GGTCGACCGG CTGCGGGGCT GGCACGAGAT GCGGCAGAAG
CTGGGCATCG GCGGACTAGT CCTGACGGAG GGACCGGAGG CTACCGAGCG GACGGGGCTG
GCCGGCGTCC GGGCGACCGC CTTCACCCCG CACTGCGTCA CCGTGCAGCC GGCCCGGATC
GCACGCGGGC TGCTCGCGGC GGTCGAGCGC CGGGGGGTAC GGGTTGCCGA ACACACCCGG
GCCCTGGCGA TCCGACCTGG CCAGGTCACG ACCGACTCCG GCACCATCCG GGCCCGGTCG
GTGCTCTGCG CCACCGAGGG CTACACCGGG CGGCTGGCCG GACACGAGCG CCGGGTCCTG
CCGCTGCACT CGTACGTGCT GGCGACCGAA CCGCTGGACG CCGCGACCTG GCAGCAGCTG
GGCTGGACCG ACTACCGGAC CGTCGCGGAG GCCCGCTACC AGTTCGGCTA TCTACAACGC
ACCCAGGACG ACCGGCTGGT GCTCGGCGGC CGGGGAGCCT ACTACCGGTT CGGGTCCGGC
ATCACCCGCG GTGACGCGGG CCGCCGGAAG GCCCACGACC GGCTCCGCCG TACCCTGGCC
GAGCTGCTCC CGGAGATAGC CGACGTACCG GTGTCGCACC ACTGGAGCGG CGTCTACGGC
CTGCACCGGC ACACGGAGCC GGAGGTGGTC TTCGACCGGG GCACCGGGCT GGGCCACGCC
GGCGGTTACG GTGGCGAGGG CATCGCCCTG AGTAACCTCG CCGCCCGCTC CCTCGCCGCG
CTGGTCGCCG GAATCAACCG ACCGGAGACC CGGCTGTGCT GGGTGGACAA CACCTCACGC
CGGTGGGAAC CGGAACCGCT GCGGTACCTC GGGGTGCGGG GCGTCAGCGC CGCGGCGACC
GGAGCTGACC GTTACGAGCA TCGCACCGAC CGGGCCGCTC CGCTGGCCCG ACTGGCCCTA
CGCGCCATCG TGTGA
|
|---|
| Protein sequence | MTRPPLTTPA TDEQQVLWLD RLPVEQRLPR PPLDGDTTAD VAVVGAGYTG LWTAYYLTTF
RPELSVVVID AGRAGFGASG RNGGWCTAEM PALLTSLVRR HGPMAAVRLY RAGQRSLDEI
HRVLTDEGID AHWRHDGSLY VARSAPQVDR LRGWHEMRQK LGIGGLVLTE GPEATERTGL
AGVRATAFTP HCVTVQPARI ARGLLAAVER RGVRVAEHTR ALAIRPGQVT TDSGTIRARS
VLCATEGYTG RLAGHERRVL PLHSYVLATE PLDAATWQQL GWTDYRTVAE ARYQFGYLQR
TQDDRLVLGG RGAYYRFGSG ITRGDAGRRK AHDRLRRTLA ELLPEIADVP VSHHWSGVYG
LHRHTEPEVV FDRGTGLGHA GGYGGEGIAL SNLAARSLAA LVAGINRPET RLCWVDNTSR
RWEPEPLRYL GVRGVSAAAT GADRYEHRTD RAAPLARLAL RAIV
|
|---|
| |