Gene Strop_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2798 
Symbol 
ID5059261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3199088 
End bp3199516 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content73% 
IMG OID640475051 
ProductBeta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ 
Protein accessionYP_001159617 
Protein GI145595320 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.673161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.655992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGCCC CGACCACGAC CCGACCCTGC CCACCGGGGG CCGCACCGTT GGCCGCTTTC 
GACGACCTCC AGGTCGGTGC CGACGGACCG CAGGTCGACG TGGTGGTGGG TGTGCCGATC
CGCGCTGATG ACCCGAACCT GTGTGGGCAC TTCCCCGGCT TCCCGGTGTT CCCCGGGGTG
TTCGTCATCG AGGCGCTGGC GCAGGCCGTG GACGTGGCGC TGCGGGCTCC CGGGCAGCCC
CGCCTGCGGC TGGTCTCCGT CGACGCGGTG CGGTTTCTCG CCCCGCTGCT GCCGCCGGAC
CGGTTGACCC TCCACGTCGT CGCGACCGCC GAGGGGCCGG ACGGCTGGTC GGTCCGGGCC
TCGGGGTGCC GTGCCGACGA GATCACGGCG GTGACCATCC GAGCCCGCTT CGGAGGCAGC
GATGCTTGA
 
Protein sequence
MSAPTTTRPC PPGAAPLAAF DDLQVGADGP QVDVVVGVPI RADDPNLCGH FPGFPVFPGV 
FVIEALAQAV DVALRAPGQP RLRLVSVDAV RFLAPLLPPD RLTLHVVATA EGPDGWSVRA
SGCRADEITA VTIRARFGGS DA