| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2782 |
|---|
| Symbol | |
|---|
| ID | 5059245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 3185638 |
|---|
| End bp | 3186312 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640475036 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001159602 |
|---|
| Protein GI | 145595305 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000241619 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGACTC ACATCGCCTC CTCACGCTCG GTGCAAACCG CCCCGGGTCG CGAGCTGCCG
ATCGAGCGGG TGCTGGCGGT ACGACGAGGC GGCGCAAGAT CTGGCAGCCT GCTCGATATG
CCTTTGATGG ACAGCCGTCA TGTCGACCAG GCCGTGGCGG AGATGGTCCG GGTGCTCACG
CCGTTTGAGT CTGCGGACTG GCGACGCCGG GCTGGCACGC TCGACTGGAG CTGCTGGGAA
ACTGTCGCCT ATGTCGCGCG TGACCTCGTC GCGTACGCCG GGCAGCTTGC TGCTCCGCCC
GACTCCGCCT ACCTTCCGTT CGACCTGGTG GTACGCGACG GCGCGTGTCC CCGCGACCTG
CTGCGACCTG TTGCCGGCGC AGGACGGCTG CTGAGCGCGG CGTTGTCGGC ATCCGACCCC
TCGGTACGAG CCCTGGCACT GGAGTCCGAC AGACCCGAGC GGCTTCGCGA GGCGCTGGAC
GTGACCGAGA CGCTGGTGCA CACCCACGAC ATCACTGAAG GGCTCGGCAT CCGCTGGCGT
CCATCCGAGG CGCTCTGCCG CGCGGTGCTC GCCCGGCTCT TTCCCGACGC TCCCCAAGGG
GATCCGGTCC AGGTGCTTCT CTGGTCCGCC GGGCGCACCG ACCTTCCCGG CCGCTCTCGA
CCTCCTGGGT GTTGA
|
|---|
| Protein sequence | MATHIASSRS VQTAPGRELP IERVLAVRRG GARSGSLLDM PLMDSRHVDQ AVAEMVRVLT
PFESADWRRR AGTLDWSCWE TVAYVARDLV AYAGQLAAPP DSAYLPFDLV VRDGACPRDL
LRPVAGAGRL LSAALSASDP SVRALALESD RPERLREALD VTETLVHTHD ITEGLGIRWR
PSEALCRAVL ARLFPDAPQG DPVQVLLWSA GRTDLPGRSR PPGC
|
|---|
| |