| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2763 |
|---|
| Symbol | |
|---|
| ID | 5059226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 3112454 |
|---|
| End bp | 3113230 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640475017 |
|---|
| Product | thioesterase |
|---|
| Protein accession | YP_001159583 |
|---|
| Protein GI | 145595286 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00381973 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCAA CCCTCGAGAA CGACCTCTGG GTGCGGCGGT TCCATCCGGC GCCGTCCAGT
GCGATTCGGC TGGTGGCGCT GCCGCACGCC GGTGGTTCGG CCAGCTACCT GTTTCCGGTC
TCCCAGGCCC TCTCGCCCGC TGTCGACGTA CTGGCGATCC AGTACCCGGG CCGGCAGGAC
CGTCGGCATG AGCCGGTGCT GGATTCGGTC ACCGACCTGG TCGACGGGGT GTTCAATGCG
CTGCGGCCGT GGCTGGACCG GCCGGTGGCA CTCTTCGGCC ACAGCATGGG CGCGGTGCTC
GCCTATGAGG TGGGGTTGCG GCTGCAACTG CGGACGGGCC AACCGCCGCT GCGACTGTTC
GTCTCCGGCC GCCGGGCCCC GTCCCGGTTC CGTGACGAGC GGTACGTGCA CACCCGGGAC
GACGCCGGGG TGCTGCGGGA ACTGGCCAGG CTCAGCGGCT CGGACCCGCG GATGCTGAGC
GATCCGGAGC TGCTGCCGAT GATCCTGCCC GCGGTGCGGG GGGACTACAA GGCGGTGGAG
ACCTACCGGG CCGACCCGGA TCAACGGCTG GACGCCCCGA TCACCGTGCT TACCGGGGAC
GCCGACCCGG TGACCACCCT GGACGAGGCG CACGACTGGC GTCGGCACAC CACCGGTGAG
TGTGACGTCC GGGTGTACCC GGGCGGGCAC TTCTATCTCA ACGACCATGC CGACGACGTG
ATCCGGCTGA TCGGGGCCGA ACTGGAGCGG CTGCTGCCCA GCGAGCCGAC CGGCTGA
|
|---|
| Protein sequence | MTATLENDLW VRRFHPAPSS AIRLVALPHA GGSASYLFPV SQALSPAVDV LAIQYPGRQD
RRHEPVLDSV TDLVDGVFNA LRPWLDRPVA LFGHSMGAVL AYEVGLRLQL RTGQPPLRLF
VSGRRAPSRF RDERYVHTRD DAGVLRELAR LSGSDPRMLS DPELLPMILP AVRGDYKAVE
TYRADPDQRL DAPITVLTGD ADPVTTLDEA HDWRRHTTGE CDVRVYPGGH FYLNDHADDV
IRLIGAELER LLPSEPTG
|
|---|
| |