| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2742 |
|---|
| Symbol | |
|---|
| ID | 5059205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3091248 |
|---|
| End bp | 3092465 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640474998 |
|---|
| Product | zinc finger SWIM domain-containing protein |
|---|
| Protein accession | YP_001159564 |
|---|
| Protein GI | 145595267 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.063627 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGTGGG GGATAGATCT ACCTTGTTCG GATAGATCCG GAGCACCTAG GGCCGTTCGA
CCTGCCTCCG CCGGAGACAG GTCCCGAACA CCCGGATTCG ACGTCCGCCC CGCCCCGGAC
GAGCGCCCCG GCCAGGCCAT CTCCGCCACG ATCACACTCA TCGGCGCCGA CCCCTCTCGG
CTCCCTCGTC GGCCGAGGAA GCCTGACCCG ACGACCGTCC AACTCGCCAG GGTCGATCGT
CCTGATGGAT TGACGGAATC GCGGTTGCGA CCCGTACGCA GTGCGACTAA ACATCGACGC
TGGCCGAAGT CCGGGCCAAG CTCACCGCCG TTCGCTTCCA GCACGAGGGT AGAGTGCGGG
CCCGTGGCGG TCCGAATTGA TATTCAGGCG TTCCATGACT CCGTTCCCTC CGCCGTACGC
GAGGCGTCGA CCCGGCTACT CGCCACTGGT GGTGTCGGAG ACCTGGAACT GACCGGCGGC
GGCATCCAGG CCGTGGTCCT TGACCGCGGT ACCGCCGTGC AGCCATGGGT GGGCATCGTT
GCCGGCAACT TCACAGGTGA GTGCGACTGC GGCACAGCCG ACGAAGACCT CTGCGCACAT
GCGGTCGCAG TTGCATTGAC CGCCTTCGAC AACGACGTCG CCTTCTCCGG TGCTGCCACC
CCACCCAGCG CCGTCTCGGT GTCGCCCGAC CACGAGGACT ACCTGCAGGC GGCGCAACGG
CTGGCGCCCC GTCAGCTGGC CAACCTCGTC GCGGGGCACG CGGTCCGCGA CCGTCTCTTC
GCCACCCGAC TGCTGGCTGA GGCCAACATG CTGCACGGCG CGGATCACAC CGGGCTGCAG
GACTTCCGGG CCGTCCTCCG TGACGCCTCG AACGCAACCA CCGGCAGGTG GGAGATCTCC
GACGTGGAGG CCGCTGGTCA CCGCCTGGCC TCCGAGGTCG AGATCCTGTG CGCTCGGCCT
GCCAGTCTTG CGATGCTCGA CCTGGTCGAG GAGGCCATCC CCGTCTGGGA TGAGCTCTCC
GGGCACCTCC GCGACGCCTA CCACATCGCC CGGACCGAAC CGGAAGAGAT CACCGACTCA
CTCCTATGTG CCCACCGCGA CCTGTGCGAC AGCCTCGACC TCGACCCGGA GGACGTCACC
GACCGGCTGA ACCGGCTCGT CGAACGCTGC CACTACGAAC TGGACATCAG CGGATACATC
GACCTCCCCC TCGGGTAG
|
|---|
| Protein sequence | MMWGIDLPCS DRSGAPRAVR PASAGDRSRT PGFDVRPAPD ERPGQAISAT ITLIGADPSR
LPRRPRKPDP TTVQLARVDR PDGLTESRLR PVRSATKHRR WPKSGPSSPP FASSTRVECG
PVAVRIDIQA FHDSVPSAVR EASTRLLATG GVGDLELTGG GIQAVVLDRG TAVQPWVGIV
AGNFTGECDC GTADEDLCAH AVAVALTAFD NDVAFSGAAT PPSAVSVSPD HEDYLQAAQR
LAPRQLANLV AGHAVRDRLF ATRLLAEANM LHGADHTGLQ DFRAVLRDAS NATTGRWEIS
DVEAAGHRLA SEVEILCARP ASLAMLDLVE EAIPVWDELS GHLRDAYHIA RTEPEEITDS
LLCAHRDLCD SLDLDPEDVT DRLNRLVERC HYELDISGYI DLPLG
|
|---|
| |