| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2737 |
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| Symbol | |
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| ID | 5059200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3083472 |
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| End bp | 3086780 |
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| Gene Length | 3309 bp |
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| Protein Length | 1102 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640474993 |
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| Product | transcriptional activator domain-containing protein |
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| Protein accession | YP_001159559 |
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| Protein GI | 145595262 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family
[COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.247337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.588178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTCG GGCTCCTTGG TCCGCTGGGC GTCTGGACGG CGGACGGCAC ACCGGTCACC
GTGCCCGATG TGAAGGTCCG TCGCCTGCTC GCCGCGCTGC TGGCCCACGA GGGACATCCG
GTGTCAGTCG ACCGGCTCCT CGAACACCTG TGGGCGGACC TACCACCAGC CAATCCGGCC
GGAGCGCTGC AGACGAAGGT GTGGCGACTG CGGCGTGCGC TGAACGCCGC GACGCCCGGC
GCCCGCGACC GCGTGGTCTC CCACCCACCG GGGTACCTGC TCCGCACCGG CCCGGAGCCG
ACCGACGCCG AACGGTTCAC GGCCTTGCTG GAGCAGGCCG CCAACACCAC CGCTGCGCAT
ACCCGGGCCG CGCTCCTCGA CGAGGCGCTG GGGCTGTGGC GCGGCCCGGT ACTGGCCGAC
TTCCCCGAGG CCCCGTTCGC CACGGCACTG ACCGCTCGGC TGGCGGAGCA TCGGTTGACC
GCCATCGAGG ACCGGGCCGA GGCCCGACTC GCCCTCGGCC AGCACCACCT GCCCAGCGGG
GAGCTCGCCG ACCTGCTGAC CCGCCACCCG TACCGGGAGC GCCTGCGTGC CCTGCACCTG
CGGGTGCTGT ACCGCGCGGG CCGACAGGGT GAGGCGCTGG ACTGCTACGA CCGATTCCGC
CGAAAGCTTG CCGACGAGTT GGGCGTGGAC CCCGGCCCCG AGCTGGTCGC CCTCCACCGG
GCGATCCTGT CGCAGGACCC GGCACTGCTC GCCCCGCCGC CGGCGAGCAG CCCGGTCACC
ATCGCGCCAG CACCGTCGGG CGCGCTGCCC CCAGCACGGG TACGCGGGAA CCTTCCCGCA
GCGCCGACCG AGCTGATCGG TCGGGCGGCG GCGGTACGCG ACCTCCACCT CCTACTCGAC
GCCGGCCGGC TGGTAACCCT GGTGGGCTCC GGCGGAGTGG GCAAGACCCG ACTGGCGGTC
GAGGCGGCTC ACCAGGTAGC CGGGGCGTAC CCGGACGGGG TGTGGCTGGT CGAACTCGCG
GCCCTGGAAG CCGACCCGGC GACCCTCGCC GGGGCGGTCC TCGCGGTGCT GGGCGTCCGC
GAGAACGCGG AGCGCCCGCC TGCCACGCCG GCCGAACGGT TGCTGGCGGC GCTGCGCGGT
CGCCAGCTCC TGCTGCTCCT GGACAACTGC GAACACGTCG TCGAACCCAT CGCCCAGCTG
GCCGACCGGG TCCTGCGACA CGCGCCGGGC GTCCGCCTGC TGGCCAGCAG TCAGGAGCCG
CTGGGCGTCG CCGGCGAGCA GGTCTGCGCC GTACCTCCAC TGGCCCTGCC GAATCCCGAG
GTCGGCGACC CGGTGTTGCT CGCCCAGGCG AGCGCGGTCC GGCTCTTCGT CACCCGGACG
AGAGCCGCCG CGCCCGGGTT CGCGCTCGAC GAGACGAACG CCCGGGAGGT CGCCGAGCTG
TGCCATCGGC TCGACGGCAT CCCGCTGGCA CTGGAGCTGG CCGCCACCCG GGTCCGCGCG
CTGGGAGTCC GCGGTCTGCT GACCCGGATC GACGACCGAT TCCGGGTACT GACCCGCGGG
CACCGGGGCG CACCACCCCG CCAGCAGACT CTCCGCGCGA TGATCGACTG GAGCTGGGAG
CTGCTCAGCG AGCCCGAGCG GCTCGTCCTG CGGCGGCTTG CGGTGCACGC GGACGGCTGC
ACGCTGGAGG CCGCCGAGGC GGTGTGTGCC GACGATGATC TCCCTGCCGA CAAGGTTCTC
GACCTGCTGG CGCGCCTGGT CGACCGCTCG CTGGTGGTCA TGGCCGAGAC GCCGGTCGGG
CCGCGGCACC GGCTGCTGGA GTCCGTGGCG GCCTACTGCG CCGAGCGGTT GCGGGAGGCA
GCCGAGGTGG CGACGGTCCG CCGTCGCCAC CGGCGGTACT ACACCGCGCT GGCCCGACGG
GCCGACGAGG AGCTGCGCGG CCCGAAGCAG CAGCAGTGGC TGGCCCGGAT CGACCAGGAG
ACCGCCAACC TGCGGCAGGC GCTGGACGAC GCGATCGCCG ACGGCGACGC GGTGGGGGCA
CTCGACCTGA GCACCGCGCT GGCCTGGTAC GGCTACCTGC GGGGCCGGCT GCGGGAGACG
CGCCGATCAA TCGAGGCCGC GCTCGCTGTC GCCGGGCCCG CGCCGGCGAC GCCACGGGCC
GCCGCCGCCT GCTGGCACGC CGGGCTGGCG TTGCTGGAGA GCGGCGGCGA ACACGCACCG
CTGGTCGCCC CCGCGCTGAG CGGTTGGCCG GCCGGGGAGG AGTTGGCGAC ACGGGCGCGG
GCCGTGGCCT TCCTCGGGCT CGCCCTGCTC AACACCGGCG ATGTGGCCGG CAGCACGGCC
CTGGTCAACG AGGTGTTGCC GGAGTTCGAG CGGTTCGGCG ACCGATGGGG CGTCGCCGCC
GCGCTGAGCC TGCGGGCGAG CCAGGCACTG GCCCGCGGCG ATCTGGCGGC GGTACACCAG
GACGGCGAAC GTGCCGTCGC CCTCTTCCGC GAGCTGGGCG ACCGGTGGGG CCAGCTGCAG
GCGTCCTTCC CGCTCACCAA CCGGGCCGAG GCAACCGGGG ACTATCCCGA AGCGGCCCGA
CTGCACCGGG AAGGCCTGGA ACTCGCCGAG GGGTTGGGGT TGTGGCTGGA GGCCGCGGAC
CGTCTCTCCG GCCTGGGCCG CATCGCGCTC CTCGCCGGCG ACTACCACCG GGCGCGCGAA
TTCCACGAGC GCGCGCTGCG GCTGGCCGGT GAGCAGAGCT GCAAACCAGC CGAGCTGTAT
GCGCAGATCG GGCTGGGGCT CGGGGCCCGC CGCGAGGGCC GCCTCGCCGA TGCCGAGCGG
CTGTTGCGCA GCGTCCTGGA CTGGACCCGG CAGCCCGGCC TGGACGCCGA CGTGGTGCGG
GCCCTGCTCC TGGCGGAGTT GGGTTTCATC GCCGAACTAC GGGGGGCCGT CCCCGCCGCG
GGTAGCCTGC ACGCCGAGTC GTTCGCCCTG GCGAGTGCCG TCGGCGACCC CCGGGCGCAG
GCGCTGGCGC TGGAGGGACT GGCCGGCGTG GCGGCCATCG ATGGCCGTCC CACGCGGGCG
GCCCGGCTAC TCGGCGCGGC GGCGATGGCT CGCGTCTCGG TGGGCGCGCC CCTGCCGGCC
GGGGAGCGGG GAGACGTGGA CCGGATCACC GCCGCCGCCC GCGCCGAGCT GGGTGCCCCG
GCGTTCACCG AGGCGTTCGA CCGGGGCAGG GCACTACGCC CGGAGCAGGC GTACGCCTCC
TCCGGTGCGA ACGGAGCTCG CACTCCGCCT GGGACCGGTG CCACTCGGCC CCCGGCGGAC
GTGGGGTGA
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| Protein sequence | MRFGLLGPLG VWTADGTPVT VPDVKVRRLL AALLAHEGHP VSVDRLLEHL WADLPPANPA
GALQTKVWRL RRALNAATPG ARDRVVSHPP GYLLRTGPEP TDAERFTALL EQAANTTAAH
TRAALLDEAL GLWRGPVLAD FPEAPFATAL TARLAEHRLT AIEDRAEARL ALGQHHLPSG
ELADLLTRHP YRERLRALHL RVLYRAGRQG EALDCYDRFR RKLADELGVD PGPELVALHR
AILSQDPALL APPPASSPVT IAPAPSGALP PARVRGNLPA APTELIGRAA AVRDLHLLLD
AGRLVTLVGS GGVGKTRLAV EAAHQVAGAY PDGVWLVELA ALEADPATLA GAVLAVLGVR
ENAERPPATP AERLLAALRG RQLLLLLDNC EHVVEPIAQL ADRVLRHAPG VRLLASSQEP
LGVAGEQVCA VPPLALPNPE VGDPVLLAQA SAVRLFVTRT RAAAPGFALD ETNAREVAEL
CHRLDGIPLA LELAATRVRA LGVRGLLTRI DDRFRVLTRG HRGAPPRQQT LRAMIDWSWE
LLSEPERLVL RRLAVHADGC TLEAAEAVCA DDDLPADKVL DLLARLVDRS LVVMAETPVG
PRHRLLESVA AYCAERLREA AEVATVRRRH RRYYTALARR ADEELRGPKQ QQWLARIDQE
TANLRQALDD AIADGDAVGA LDLSTALAWY GYLRGRLRET RRSIEAALAV AGPAPATPRA
AAACWHAGLA LLESGGEHAP LVAPALSGWP AGEELATRAR AVAFLGLALL NTGDVAGSTA
LVNEVLPEFE RFGDRWGVAA ALSLRASQAL ARGDLAAVHQ DGERAVALFR ELGDRWGQLQ
ASFPLTNRAE ATGDYPEAAR LHREGLELAE GLGLWLEAAD RLSGLGRIAL LAGDYHRARE
FHERALRLAG EQSCKPAELY AQIGLGLGAR REGRLADAER LLRSVLDWTR QPGLDADVVR
ALLLAELGFI AELRGAVPAA GSLHAESFAL ASAVGDPRAQ ALALEGLAGV AAIDGRPTRA
ARLLGAAAMA RVSVGAPLPA GERGDVDRIT AAARAELGAP AFTEAFDRGR ALRPEQAYAS
SGANGARTPP GTGATRPPAD VG
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