| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2731 |
|---|
| Symbol | |
|---|
| ID | 5059194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 3076625 |
|---|
| End bp | 3078043 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640474987 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_001159553 |
|---|
| Protein GI | 145595256 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0114478 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.981249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGG CACCGACACC GCTGGCAGCG ACCCTGGACA CCGCCGCTGT GACAGCCCTA
CGCCGTCTGG TCACCGGTCG GGTCATCACC CCTACGGACC ACGACTACGA CCGGGCTCGC
AGAATCTTCT TCGACGGATA TGAGGGTCGA CCGGCCGCCA TCGTGCGCGT CGTTGACGTA
GAGGACGTTC CGCCGGTACT CGACATCGCA CGCAGAACCG GTGTACCTCT GGCGATTCGC
AGTGGCGGCC ACTCGGTACA CGCCGTTTGC GACGACGGCA TCGTGCTAGA CCTCTCCGGC
CTGCGTGCGT TGGACATCGT GCCAGAGAGC CGCACTGCCG CAGCGCAGCC TGGTGTCACT
GCTGCCCAGT ACACCAACGC TGCCGGCGCC TTCGGCCTGG CGACCAGCTT CGGTGATACC
GGTTCGGTAG GGCTCGGTGG GCTGGTGTTG GGTGGTGGCA TCGGCTTTCT GGTACGCAAG
CATGGACTGA CGATCGACGA TCTGATTGCC GTGGAGATGA TCACTTCGTC CGGCGATCGG
CTGCGAATCG ACGCGGACAG CCATGCCGAC CTGTTCTGGG CGCTGCGCGG CGGCGGCGGC
AACTTCGGTG TGGTCACCCG GCTACACCTG CGTTTGCACC GGGTCGCCCC GATTGTCGGC
GGCACGTTGG TCCTGCCCGC GACGCCAGCG ACCATCGCAG GGTTCCTCGC CGCGGCTGAT
TCCGCGCCCG ACGAGCTGTC CACGAAGGTC AACGTGATGC CCATACCGCC GCTGCCCGGT
GTGCCCGAGG AACACCACGG GCGAATGGGC CTCTTGGCGA CGATGGTCTT CGCCGGAGAT
GTCGGCTCCG CAGAGTCGAT CTACGCGCCG TTCCGCGCGC TGGCAACTCC TCTCGCGGAT
CTTATTCACA CCATGCCCTA CGCCCAGATC TTCGAGCCGG ACGACGAGAA CTACCATCCG
CGGGCGATGT CCCGGACCTT CTTTACCGAC GAACTCCTGG ATGAGACGAA AGCGGAGGCC
CTGCTGGCCC ACCTAGGCTC GTCCACGGCG CTGGTTCCGG TGGCGCAGCT GCGGGTGTTG
GGCGGGGCGA TGGCGCAGGT TGCTGAGGAC GCCACCGCCT TCGCGCACCG GGGGCGGAAA
ATGATGATCA GTGTGGCAGC GGTCCACGAA AGCCCGGACG AGACCGACAC TCATCGGTCC
TGGGCGGACA ATTTCGTAGC CGAGCAGCGC TCATCGCAGC CCGGTGCGTA CGTCAACTTT
CTCTACGACG ACGGCCCCGA CCGACGGGGT GAGGCATACC CGCGACGGAC GTGGGACCGC
CTCGCCCGGA TCAAGCAACG GTACGATCCG ACGAACCTCT TCCGGGTCAA CGTCAATATT
CCCCCTGGCG CGGCCCATCC GGGGCCTTCT GACAGATGA
|
|---|
| Protein sequence | MGKAPTPLAA TLDTAAVTAL RRLVTGRVIT PTDHDYDRAR RIFFDGYEGR PAAIVRVVDV
EDVPPVLDIA RRTGVPLAIR SGGHSVHAVC DDGIVLDLSG LRALDIVPES RTAAAQPGVT
AAQYTNAAGA FGLATSFGDT GSVGLGGLVL GGGIGFLVRK HGLTIDDLIA VEMITSSGDR
LRIDADSHAD LFWALRGGGG NFGVVTRLHL RLHRVAPIVG GTLVLPATPA TIAGFLAAAD
SAPDELSTKV NVMPIPPLPG VPEEHHGRMG LLATMVFAGD VGSAESIYAP FRALATPLAD
LIHTMPYAQI FEPDDENYHP RAMSRTFFTD ELLDETKAEA LLAHLGSSTA LVPVAQLRVL
GGAMAQVAED ATAFAHRGRK MMISVAAVHE SPDETDTHRS WADNFVAEQR SSQPGAYVNF
LYDDGPDRRG EAYPRRTWDR LARIKQRYDP TNLFRVNVNI PPGAAHPGPS DR
|
|---|
| |