Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2728 |
Symbol | |
ID | 5059191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3074043 |
End bp | 3074945 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640474984 |
Product | hypothetical protein |
Protein accession | YP_001159550 |
Protein GI | 145595253 |
COG category | [R] General function prediction only |
COG ID | [COG4122] Predicted O-methyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00309859 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.614754 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATGC TCTCCGGAGC CCGAGGTGTT GACGAGTCAG GCGAACGCGT CCCGGGTGGG CCAAACTCAG ATCACACGTT CAGAGCTGCC CTCGACCGGT TGCGGGTACC CGGCATGGGA ACCGAGGTCG TGGCACCGCT GCTGTCGAAC CTCATTCACA TGGTCCGTCC GACGCGGGTG CTTGAAGTCG GCATGGGGTA CACCACGTTG TTCCTGGCCA GGGCACTGGC TGAGGTCGAC CGGGCGATCG AAGACGAGAG ACAGGCCTTG GTCGAAAAGA CCGAGCCGTA CCTACGTGAC GGGCGCGATC TCGACGAGAA GTGGATCGAG ACGACACCCG CGCTCCTGGT TCCCGGTTTC TACAACAGGC GCAGGGCAAC CAGGTTCATC GCTGTCGACG ATCTGTCCGA TGAGCACTCC TCGGCGCGAA GGGTAGGCGA AGCACTCCAC GAAGTTGGGC TCGCGGATCG GGTCACTGTT GTCAACGGAC AGCTTCGGGA CTGCCGGGAG GCGCTACCCG AGGGTTTCGC GCCCATCGAC TTCGCCTGGG TGGACGCCTG GGAGTGTCTC TACTTTTTCG AACACTTCTG GGATCTGATC GACCCGGACG GCGGCCTACT CGTCATGCAC TACCTCATGA CCTATCCCGA GGGTGAGGCT ATCCTGGAGT ACATTGCAGA CTCCCAACGG CTTCGCGCGG GTGAATTCGA GGTGCTGAGC CTTCTCGAGG GCCAAAAACT GCGGCAAAAC AGCCTGACCG TGATCCGCAA GACCGCCGGC ACCAAACCCA AAACGTACGC TGAGCAGGGG CAGGTTTTCC CGATGGACGG CAGGTTCCGA GAAGAGGCGA ACACCCTGCT CGAGAACGCC CGTGGCCACC GTTTGCGCGG TTCGGACAGA TAG
|
Protein sequence | MTMLSGARGV DESGERVPGG PNSDHTFRAA LDRLRVPGMG TEVVAPLLSN LIHMVRPTRV LEVGMGYTTL FLARALAEVD RAIEDERQAL VEKTEPYLRD GRDLDEKWIE TTPALLVPGF YNRRRATRFI AVDDLSDEHS SARRVGEALH EVGLADRVTV VNGQLRDCRE ALPEGFAPID FAWVDAWECL YFFEHFWDLI DPDGGLLVMH YLMTYPEGEA ILEYIADSQR LRAGEFEVLS LLEGQKLRQN SLTVIRKTAG TKPKTYAEQG QVFPMDGRFR EEANTLLENA RGHRLRGSDR
|
| |