| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2714 |
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| Symbol | |
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| ID | 5059177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3057393 |
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| End bp | 3058703 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640474970 |
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| Product | sigma-70, region 4 type 2 |
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| Protein accession | YP_001159536 |
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| Protein GI | 145595239 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.528766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG ATCAGGATAT CGAAAGGCTG CTGCGCCGCT GCGCGCCGAC AGCTCTCGAT
GCACTGGTCC GCCGGCACGG GCAGTTCGAC CTATGTGAGG ACGCACTCCA AGAGGCGCTA
CTGGTCGCCG CCACGTCGTG GCCCCAGCGC GGCCAGCCGG ACGAACCTGT CGCATGGTTG
GTCAAAGTCT CCAACCGCAA GCTGACCGAC TATTGGCGCA GCGAGCATGC ACGACGTCGA
CGTGAGGACA TCGTCGCCGC GCAGGAGGCT CCGGCGCTGC GACATGCTCC TGGTGCCGAT
GCGGAGCTAC TTGCCGACAC ACCGAAACCC GCACCGGATG ACGAGCTTGA GATGCTGCTC
CTCTGCGCGC ATCCCGCGTT GTCCGAACTC AGCAAGATCG CCCTCGCTCT CCGCACGGTT
GGTGGACTCA CCACCGCGGA GATCGCCCAG GCCACGATGG TGACCGAAGC GACCATGGCC
CAGCGCATCA GCCGCGCCAA GGCAACGGTC CGTGCCGCAG GTGCCTCATT CACCCGGTCC
CACCGCGATC GGGAGGACCG CCTCGCTGCT GCGCTGCACG TGCTGTACCT GATTTTCAAC
GAGGGCTACA CCGCAACCAT GGGTGAGAAC CTGATTCGAG CCGACCTGAC TGTGGAAGCC
ATCCGCGTGA CTCGTCAGCT TCATCGGCTG CTGCCCGATG ATGGTGAAGT CACCGGGCTG
CTCGCACTCA TGCTTCTCAT CGATGCGCGG CGGAGCGCGC GGACCACCGA GGACGGACGC
CTGGTGCCGC TGGCCCAGCA GGATCGACGC CGTTGGGATT ACGGCGCCAT CGCCGAAGCG
GTGAAGCTGT TGGAACACGC CTTGGCGACG GCCCCCCTGG GGCCCTACCA GCTCCAAGCC
GCGGTCGCTG CCGTGCATGC CGAGGCGGCA AGCGCCGAGG AAACCGATTG GCAACAGATC
GCCATCCTGT ATGGAATGCT CGAACGACGA TCGGGCAATC CCGTAGTCAC GCTGAACCGT
GCGGTTGCGG TTGGATTCGC ACACGGGCCC GGTGCTGGTC TCGCCGTCCT CGATTCAGTG
GCCGACGATG TGCGCCTACG TCGTAGCCAC CGACCGGACG CAGTCCGCGC CCACCTCCTC
GAACGACTCA ACGAACACGC CAGTGCACGT GAGCACTATC GCCGCGCAGC CCGCGCGGCG
CACAATCAGT GTGAGAAGCG CTATCTAGAG GAGCGTGCTG CCGATCTGAC GGCGGTTGAG
CCGACCACGT CGTCCGACTC CGACCGGGCC CTTGTCACCA TCGGTGCCTG A
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| Protein sequence | MSDDQDIERL LRRCAPTALD ALVRRHGQFD LCEDALQEAL LVAATSWPQR GQPDEPVAWL
VKVSNRKLTD YWRSEHARRR REDIVAAQEA PALRHAPGAD AELLADTPKP APDDELEMLL
LCAHPALSEL SKIALALRTV GGLTTAEIAQ ATMVTEATMA QRISRAKATV RAAGASFTRS
HRDREDRLAA ALHVLYLIFN EGYTATMGEN LIRADLTVEA IRVTRQLHRL LPDDGEVTGL
LALMLLIDAR RSARTTEDGR LVPLAQQDRR RWDYGAIAEA VKLLEHALAT APLGPYQLQA
AVAAVHAEAA SAEETDWQQI AILYGMLERR SGNPVVTLNR AVAVGFAHGP GAGLAVLDSV
ADDVRLRRSH RPDAVRAHLL ERLNEHASAR EHYRRAARAA HNQCEKRYLE ERAADLTAVE
PTTSSDSDRA LVTIGA
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