| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2706 |
|---|
| Symbol | |
|---|
| ID | 5059169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3047931 |
|---|
| End bp | 3048851 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640474962 |
|---|
| Product | wyosine base formation |
|---|
| Protein accession | YP_001159528 |
|---|
| Protein GI | 145595231 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03083] uncharacterized Actinobacterial protein TIGR03083
[TIGR03084] conserved hypothetical protein TIGR03084 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.338329 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGTCG GCCCTTCCTG GCGCCTGCCG GCCGAGTTCG GCGGGCTAGA AGCGGAGCCG
GGCGACCCCG GCCCCGCCGT CTCGACAACC GGACAACCGA AGGGGTACGA CGTGACCGAT
CAGCAGCAGG ATGTGATCGC CGCCCTGATG GCGGAGGGAA AGGAGCTCGA CGGGCTGGTG
GCCGGACTGA CGCCCGAGCA GTGGTCGCTG CCGACCCCAG CTCCGGGCTG GACGATCGCA
CACCAGATCG CCCACCTGGC GGCCACGTTC CGCCTCGCCG GGATGGCGGC GGCCCAGCCG
GACGCCTTCA CCACGATGGT GTCCCGGCTC AGCGGGGACT TCAACAACAA TGTGGAGGCC
GCTCTCTCGG AGTACCTCAG CGATCCGCCA GAGGTGCTGT TGAGGCGGTG GCGGGCCGAG
CGCACCACCG CCGAGAAGGC TCTCGCCGCC GTGCCGCCCA CCCAGCTGGT GCCGTGGCTG
GTACGGCCGC TGCCGCCGGG AGTCCTCGCC GCCGCAGGAA TGATGGAGCT GTTCGGGCAC
GGGCAGGACA TTGCTGACAC GCTCCAGGTC CGCCGGACGC CCACTGACCG GGTCGGGCAC
CTGGTCGGCT TCGCCGTCCG TACCTGGGAC TTCGGCTACC TGGCCCGAGG GCTCACCCCG
CCGGAGACCA CGCTGCGCTT CGAGCTGACC GCCCCGTCTG GCCAGGTGTG GACCTTCGGT
CCAGAGGACT CGACGGAGCT GGTGACCGGC AGCGCATGGG ACTTCTGCCT GCTCGTCTGC
CGACGCCGCC ACCGCAACGA CCTAGCGCTG CGGGCATCCG GCACGGTGGC CGACCAGTGG
CTGGACATCG CCCAGGCGTA CCGGGGGCCG GCCGGCCCAG GCCGAGAACC GGGCCAGTTC
GCTGAGGCGG TCCGGAGCTA A
|
|---|
| Protein sequence | MLVGPSWRLP AEFGGLEAEP GDPGPAVSTT GQPKGYDVTD QQQDVIAALM AEGKELDGLV
AGLTPEQWSL PTPAPGWTIA HQIAHLAATF RLAGMAAAQP DAFTTMVSRL SGDFNNNVEA
ALSEYLSDPP EVLLRRWRAE RTTAEKALAA VPPTQLVPWL VRPLPPGVLA AAGMMELFGH
GQDIADTLQV RRTPTDRVGH LVGFAVRTWD FGYLARGLTP PETTLRFELT APSGQVWTFG
PEDSTELVTG SAWDFCLLVC RRRHRNDLAL RASGTVADQW LDIAQAYRGP AGPGREPGQF
AEAVRS
|
|---|
| |