| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2686 |
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| Symbol | |
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| ID | 5059149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3020891 |
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| End bp | 3023059 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640474942 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001159508 |
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| Protein GI | 145595211 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.288393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCG CGAGACCCCA TCCGATTGGC CGCACCGGCC GCCTGGTGCT CGCCGCCGCG
CTGGTCGCGG TGGGCGGCAC GGCGGTCGTC ACCGCCGCGA CCACCGCCAC GTCAGCCCGC
GCCGCTGTCG TCCTCAACGA CAGCGAGGTG ACCGCCAACC TGTGGCAGTG GAACTGGGAC
TCGGTCGCCG CTGCCTGCAC CGACCACCTT GGCCCCGCCG GCTACGGCGC GGTGCAGGTG
GCCCCGCCGC AGGAGTCGGT CTACCTACCC AACAGCGCGG ACGGGGTGCA CCCCTGGTAC
GAGGTCTACC AGCCGGTCTC GTACCAGCTG GAGAGCCGGT TCGGTAACCG GGAGCAGTTC
GCCAGCATGG TCAGCACCTG CCACGACGCG GGTGTGCGGG TCTATGTGGA CGCGATCGTC
AACCACATGG CCGGCACCAA CAACCCGCCC GGCACCCGTG GCTACGCCGG CACCGAGTTC
TCCGGCTACG ACTACCCGGC GGTTCCCTAT AGCGGATGGG ACTTCCATCG CCCGGGCGAC
AACTGCCCGA CCGACGGGTC CATCAATGAC TGGGACAACG TCGCCCAGGT GACCAGCTGT
GAGCTGCTCT CCCTGGCCGA TCTCTACACC GAGAAGGAGT ACGTGCGAGA CACGATCGCG
GGGTACCTGA ACGACCTGAT CGGCCTCGGC GTCGACGGCT TCCGGGTGGA CGCGGTCAAG
CACATCCGAA AGGACGACTT CGCGGCGATC CTGAGCAGGC TGGACGACAC CGTCGCGGAG
GGGCGACGCC CCTACGTCGC CCAGGAGATC TTCGACGGCG CCAACAACCC TGACCTCCAG
GCCCGAGCGT TCATCGGCAA CGGCGACGTG CTCGACTTCG CGTACGCCAA GGGCATTCGC
TCCGCCTTCC AGGGCTCCGT CGCGGCACTG CAGAACATCC CGAACTGGAA CCTCGACGCG
CCGAGTGCCA ACGTCTTCTC GATGGTCACC AACCACGACC TGGAGCGCGA CGGCGTGGTG
CTGTCGTACA AGGACGGCAC CGACTACGTG CTCGCCAACT ACTTCGCCCT GGCCTACCCG
CACGGCAAGC CGTCGGTCTT CGACAGCTTC ACCTGGTCGG ATCGGAACCA GTCCCCGCCG
CACGACGGCG GTGGGTATGT CACCGACGCG GTCTGCGGCG GCACCTGGAA CTGTCTGACC
CAGAGCACCG GCATCAAGGG CATGGTGGGC TGGGCGAACG CGGCGCGTTC GGTCCAGAGC
ACCGCCGACT TCACCGTGGT CAACGACAAC GTGATCGGCT TCCACCGCGG GGACCGGGCC
TGGATCGGCA TCAACGACTC CGGCGCCACG GCCACCGCCA CCTTCACCAC CGGCCTCGCC
GACGGTGACT ACTGCGACGT CATCTCCGGC GCCGCCGGAG GTGCCGGCTG CACCGGCGCT
ACGGTGAGTG TCACCGGCGG CCAGGCCACC GTGAGTATCC CGGCGAACGA CGCCGTCGCC
ATCCACGTCA ACGCCCGCCC CGGCGCCACC CCGTCACCGA CGGTCAGCCC CACCGGCGAC
CCCACCGACC AGATCGCCAC AACCTTCACG GTCAGCGCCA CGCCCGGCGC CGATCAGGAC
GTCTACGCCG TCGGCAGCAT CTCCGAGCTG GGCTCCTGGG CTCCGGCCGC CGCGGTGCGG
CTGACCCCGC AGGGTGGGAA CACCTACCGC GGCACGATCG ACCTGCCCCC GTCCACCGCG
GTCGAGTACA AGTTCATCAA GGTGACCAGC GGGGGAGAGG TAACCTGGGA GTCCGGCGAG
AACCGGAGCT TCACCACCCC CGCCTCCGGC ACATTCGCGG TGACGGAGAC CTTCCGGGGT
GATGTGGTTT CCGGCCCGGC GATCGCCAGC TCGTTCCACG CCACCGTTTA CACCTACTTC
GGGCAGAACG CCTTTGTCAT CGGTAACGTC GCGGAGCTGG GCAGTTGGAA CCCGGACAAC
GCCGTCGCGC TCTCCGCGGC TGACTACCCG GTATGGCGGG CAACTGTCGA CCTGCCGCCG
AACACCAACA TCGAGTACAA GTACCTGAAG AAGAATCCGG ACGGGTCAGT GACCTGGGAG
TCCGGAGCGA ACCGGAGCTT CACCACTCCG GCCACCGGTA CCAACACCAA CACCGACACC
TGGCGATAG
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| Protein sequence | METARPHPIG RTGRLVLAAA LVAVGGTAVV TAATTATSAR AAVVLNDSEV TANLWQWNWD
SVAAACTDHL GPAGYGAVQV APPQESVYLP NSADGVHPWY EVYQPVSYQL ESRFGNREQF
ASMVSTCHDA GVRVYVDAIV NHMAGTNNPP GTRGYAGTEF SGYDYPAVPY SGWDFHRPGD
NCPTDGSIND WDNVAQVTSC ELLSLADLYT EKEYVRDTIA GYLNDLIGLG VDGFRVDAVK
HIRKDDFAAI LSRLDDTVAE GRRPYVAQEI FDGANNPDLQ ARAFIGNGDV LDFAYAKGIR
SAFQGSVAAL QNIPNWNLDA PSANVFSMVT NHDLERDGVV LSYKDGTDYV LANYFALAYP
HGKPSVFDSF TWSDRNQSPP HDGGGYVTDA VCGGTWNCLT QSTGIKGMVG WANAARSVQS
TADFTVVNDN VIGFHRGDRA WIGINDSGAT ATATFTTGLA DGDYCDVISG AAGGAGCTGA
TVSVTGGQAT VSIPANDAVA IHVNARPGAT PSPTVSPTGD PTDQIATTFT VSATPGADQD
VYAVGSISEL GSWAPAAAVR LTPQGGNTYR GTIDLPPSTA VEYKFIKVTS GGEVTWESGE
NRSFTTPASG TFAVTETFRG DVVSGPAIAS SFHATVYTYF GQNAFVIGNV AELGSWNPDN
AVALSAADYP VWRATVDLPP NTNIEYKYLK KNPDGSVTWE SGANRSFTTP ATGTNTNTDT
WR
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