| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2684 |
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| Symbol | |
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| ID | 5059147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3018052 |
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| End bp | 3020028 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640474940 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001159506 |
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| Protein GI | 145595209 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.954713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0577257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGTGA AACCACGATT GCATGCTGCC GCGGTGGCGG CCTGCGTAGC TCTGGGGCTG
ACAGCCGCCG CCCCGGCCGC GTTCGCCACC ACGTCACCCG AGCCGGAGGC GCAGGTCGTC
TCGGCCGTAC CGGCGGCGGA CTGGCTACAC ACCGATGGCA ACAAGATTGT GGATGAGGCT
GGTAACCAGG TGTGGTTGAC CGGCGCGAAC TGGTTCGGCT ACAACGCCAC CGAGCGAGTC
TTCCACGGAC TCTGGGCGGG CAACATCGAG ACCATCACCC GGCAGATGGC CGAGCGTGGA
ATCAACATCG TTCGGGTGCC GATCTCCACT GAGTTGCTGC TGGAGTGGAA GGCCGGCCAG
ACGGTGCTGC CGAACGTGAA CCTGTCGGTC AACCCGGAGT TGGCTGGCAT GGACAACCTG
CAGATCTTCG ACTACTGGTT GGCCCTCTGC GAGGAGTACG GCCTGAAGGT CATGCTCGAT
GTGCACAGTG CCGAGGCTGA CAACTCTGGC CATTTCTATC CGATGTGGCA CAAGGGGGCA
ATCACGCCGG AGCTGTTCTA CCAGGGCTGG GAGTGGGTAG CCGCTCGGTA CCAGAACAAC
GACACGATTG TCGCGATGGA TATCCAGAAC GAGCCGCACG GCACTCCGAA CAACCCGCCC
CGGGCCAAGT GGGACGGCAC CAGCGACATC GACAACTTCA AACACGCCTG TGAGACGGCC
GGCAACCGAA TTCTGGCGAT CAACCCGAAC GTGCTGATTC TCTGCGAGGG CGTCGAGGTC
TACCCGCGGC CGGGGGAGAG CTGGGACTCA CCCAACACCG ACCCGGACCA GAGCCCCAAC
TACCACTACA ACTGGTGGGG CGGCAACCTG CGTGGGGTGA AGGACCACCC GATCAACCTG
GGAGCCCACC AGGACCAGCT GGTCTATTCG CCGCACGACT ACGGGCCGCT GGTGCATGAG
CAGCCGTGGT TCCAGAAGGA CTTTGACAAG ACCACGTTGA CCAACGACGT GTGGCGGCCA
AACTGGCTCT ACCTCCACGA GGAAGACACC GCGCCGCTGC TGGTCGGCGA GTGGGGTGGC
CGGTTCGGGC AGGACGATCG GCAGGACAGG TGGCTGAAGG CCCTGCGGGA CCTGATGGCG
GAGATGGTGA TTCACCATAC CTTCTGGTGT CTCAACCCGA ACTCCGGCGA CACCGGCGGC
CTGCTGCAAC ACGATTGGCA GACCTGGGAC GAGGTCAAGT ACGACCAGGT GCTCAAGCCG
GCGCTCTGGC AGCACAACGG CAAGTTCGTC AGCCTTGACC ACCAGGTACG CCTCGGTGGC
GAAGCCTCGA CCACCGGCAT CAGCCTCACC GAGCGCTATG CCGGCGGCGG GAACGACACC
GTCGTGCCGA CCGCCCCGGG TCGTCCCGTG GCCAGTGACC TGACTTCCTC GGCAGTCACC
CTGACCTGGG AAGCGTCCAC TGACAACGTC GGAGTTGTCG CGTACGAGGT GCGGAACGCG
ACAGACGGTG GCCCGCCGAA CACGGTCGCC ACCGTCGCCG GTACCACCTA CCAGGTGACC
AACCTCGCGG CCGAGACCGA ATACACCTTC ACGGTACGGG CCCGGGACGC GGCCGGAAAC
TTCTCCGCCG CCTCCCCGGC CCGTACCGTC ACCACCCCAC CCGGTGGTGG TGGAGGCAGC
GGCTGTAGCG CCACGTACCT GCTGATGAAC ACGTGGTCGG GGGGCTTCCA GGGTGAGATC
ACCGTGGAAA ACACCGGTCC CGCAGCCATC GCCGGCTGGC GGGTCAGCTG GAACGACCCG
GGCGGGACTG CGATCACCTC GCTGTGGAAT GGCAGGTGGA CGGTCACCGA TGGCGCGAAT
GTGGTGATCA ACGAGTCGTA CAACGGTCAG CTGGCGGCCG GGAGTAGCAC CACGTTCGGC
TTCACCGGGA CCGGTCCGGG CACCGCGCCG GGCGGGCTGA CCTGCTCCGC CCCGTGA
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| Protein sequence | MSVKPRLHAA AVAACVALGL TAAAPAAFAT TSPEPEAQVV SAVPAADWLH TDGNKIVDEA
GNQVWLTGAN WFGYNATERV FHGLWAGNIE TITRQMAERG INIVRVPIST ELLLEWKAGQ
TVLPNVNLSV NPELAGMDNL QIFDYWLALC EEYGLKVMLD VHSAEADNSG HFYPMWHKGA
ITPELFYQGW EWVAARYQNN DTIVAMDIQN EPHGTPNNPP RAKWDGTSDI DNFKHACETA
GNRILAINPN VLILCEGVEV YPRPGESWDS PNTDPDQSPN YHYNWWGGNL RGVKDHPINL
GAHQDQLVYS PHDYGPLVHE QPWFQKDFDK TTLTNDVWRP NWLYLHEEDT APLLVGEWGG
RFGQDDRQDR WLKALRDLMA EMVIHHTFWC LNPNSGDTGG LLQHDWQTWD EVKYDQVLKP
ALWQHNGKFV SLDHQVRLGG EASTTGISLT ERYAGGGNDT VVPTAPGRPV ASDLTSSAVT
LTWEASTDNV GVVAYEVRNA TDGGPPNTVA TVAGTTYQVT NLAAETEYTF TVRARDAAGN
FSAASPARTV TTPPGGGGGS GCSATYLLMN TWSGGFQGEI TVENTGPAAI AGWRVSWNDP
GGTAITSLWN GRWTVTDGAN VVINESYNGQ LAAGSSTTFG FTGTGPGTAP GGLTCSAP
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