Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2676 |
Symbol | |
ID | 5059139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3011014 |
End bp | 3012687 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640474932 |
Product | 3-ketosteroid-delta-1-dehydrogenase |
Protein accession | YP_001159498 |
Protein GI | 145595201 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0902529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0264921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGATAT CGGAGGACGA ATTCGATGTT GTCGTCGTCG GCAGCGGCGG TGCCGGCATG GTCGCGGCAC TCGCCGCGGC GTACCGAGGG CTGAGTACGG TCGTGCTGGA GAAGGCCGGG ACATACGGCG GTTCCACCGC TCGCTCCGGC GGTGGGCTCT GGCTTCCCGG TAACGAGGTG CTGGCCCGGG CTGGGGTCGC CGACCGCGCT GAAAGCGCAC GCACCTACCT GGCGTACGTC GCCGGCGCCG ACGCCACCCT GGCCCGGCAG AACGCGTTCC TCTCCGCCGC GCCGGAGGTT GTCGCCTTCG TCCGTGCCCA CACCCCACTC GACTTCGCCT GGGTGCCCGG CTATCCGGAC TACTACCCCG AGGCACCCGG CGGGCTTCCG GGCGGGCGCA GCATCGAGCC GCTCCTGCTC GACACCCGGT TGGTCCGAGC TGACCTCGCG ACCTTGGCCG CGCCGTACAG GGCAACGCCG GAGGGGGTGG CGGTCACCCA GGTCGACTAC CGGTGGCTGT CGCTGGGTCT CCGACATCCG CGGGCGATCC GCACCGTGGC CCGGCTCGCC GCCCGCGGCC TGGGCGCCCG GATCCGGCGC CGGCAGCTAC TCACCATGGG CCAGGCGCTC GCCGCCGGGC TCCGCGCCGG CCTGCGTCAC GCCGGCGTCC CGGTCCGGCT CAACACACCG ATGACCGACC TCCTCGTCGA ACGGGGGCGG GTCACCGGGG TTCACGCCAC GCATGTCGGC GCCCCGGTGC TGCTCCGCGC CCGGCGAGGT GTACTGCTGG CCAGCGGCGG ATTTGAGCAC AACCAGCCGA TGCGCCAGAA GCACCAGGAG GGGATCGGCA CGGAGTGGAC CGCCGGCGCG GCCGGCAACA CGGGCGATGG CATCGAGGCG GGCGAACGGC TCGGCGCCGC CCTCGACCTG ATGGACGAGG CCTGGTGGGG GCCGTCGATT CCGCTCCCCG GCGGGCCTTA CTTCTGCCTC GCCGAACGCA ACCAGCCCGG CTGTCTCATG GTTGATGCCA ACGGCCAGCG CTTCGTCAAC GAAGCGGCAC CCTACGTGGA CGCGGTGCAC GCCATGCGCA GCCCGGGTGT ACGCCAACCG GCGTGGTTGG TGGCCGACCA GACCTACCGG GACCGCTACC TGTTCGCCGG GCGGGCCCCA CGCTCCCCGC TACCGCGGCA CTGGTTCACC TCGGGGGCAG CGCACCGCGC CGACACGCTG GACAACCTGG CCACGCAGAT CGGCGTGCCC GCGGCCGCGT TGGAAGACAC CATCCGCCGG TTCAACGAGT TCGCGCAGCG CGGTCGGGAC GATGACTTCC ACCGCGGCGA CTCGGTCTAC GACCGCTACT ACGGCGACCC GCGGCATCGG CCCAACCCGT GCCTGGGCAT CGTGGCCAGA CCCCCGTTCT ACGCATTCCG CATGGTCCCC GGCGACCTGG GCACCAAGGG CGGCCTGCGT ACCGACGATC GAGCCCGGGT GCTGCGCCCG GACGGCACGG TCGTTCCCGC GCTGTACGCG GCGGGCAACG TCAGCGCCTC GGTGATGGGG CGCAGCTATG CCGGCGCCGG TGCGACCCTC GGCCCGGCCC TCGTCTTCGG CTACCTGGCG GCACTCGACC TGGCCACGGC GGCCGCCACC CCCGCACCTA TCCAGGAGGA CTGA
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Protein sequence | MSISEDEFDV VVVGSGGAGM VAALAAAYRG LSTVVLEKAG TYGGSTARSG GGLWLPGNEV LARAGVADRA ESARTYLAYV AGADATLARQ NAFLSAAPEV VAFVRAHTPL DFAWVPGYPD YYPEAPGGLP GGRSIEPLLL DTRLVRADLA TLAAPYRATP EGVAVTQVDY RWLSLGLRHP RAIRTVARLA ARGLGARIRR RQLLTMGQAL AAGLRAGLRH AGVPVRLNTP MTDLLVERGR VTGVHATHVG APVLLRARRG VLLASGGFEH NQPMRQKHQE GIGTEWTAGA AGNTGDGIEA GERLGAALDL MDEAWWGPSI PLPGGPYFCL AERNQPGCLM VDANGQRFVN EAAPYVDAVH AMRSPGVRQP AWLVADQTYR DRYLFAGRAP RSPLPRHWFT SGAAHRADTL DNLATQIGVP AAALEDTIRR FNEFAQRGRD DDFHRGDSVY DRYYGDPRHR PNPCLGIVAR PPFYAFRMVP GDLGTKGGLR TDDRARVLRP DGTVVPALYA AGNVSASVMG RSYAGAGATL GPALVFGYLA ALDLATAAAT PAPIQED
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