Gene Strop_2670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2670 
Symbol 
ID5059133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3004768 
End bp3005664 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID640474926 
Productalpha/beta hydrolase fold 
Protein accessionYP_001159492 
Protein GI145595195 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00899476 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0694304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTCGG GCTGTCCATC GCGGACGCGA TGGTGTGAGG ACGCCATGAC GACCAGCACA 
GTCATCGAAG CCACCGCCGC CGGGCTGCAC TACCACCGGG CCGGGCCGGC GGGCGTGCGT
CCGGTCGTGC TGCTGCACGG CGGTGGGCCG GGTGCCTCGG CATGGAGCAA CTTCGGGCGG
ACGGTCCCGG TCTTCGCTGA GCGATTCGAC ACCCTCGCCG TTGACCAGCC GGGATACGGC
GGGTCCGAGA ATTGCCCGAG TGGCCGGCAG TACTTCACGC ATGCGGCCGA CCGGCTCGCG
GCCTTGCTTG ACGAGGTGGG CCTGGACCGG GTCGACTTCA TCGGCAACTC GCTCGGCGGT
GGCACCGCGG TCCGGTTCGC CGTGCGCTAC CCGGAGCGGG TCGGCCGGTT GCTGCTGATG
GGCCCCGGCG GGCTCAGCCT CAACGTCTTC GCCTCCGACC CGACCGAGGG GGTCAAACGG
CTGGCCGCGT TCGGCGCACC GCCCGGCCCC AGCCGGGAGA AGCTGGCGGA GTTCCTGCGC
ACGCTCGTGT TCGATCAATC GCTCGTCACC GACGAGCTGA TCGATGAGCG AATGCGGGCC
GCGACCGACC CGGACGCCCT GCGCGGCATG CGTGCGCTGG GCGCCTCGTT CGCCGACCCG
GACCTCTATG AGGAGGGCCT GCTGTGGCGC GACGCCCACC GGCTGCGCAA CGAGGTCCTC
CTGGTGTGGG GTCGGGAGGA CCGGGTCAAC CCCCTCGACG GGGCACTGGT CGCGCTCAAG
CTGATCCGCC GCTGCCGGCT GCACGTCTTC GGTGGCTGCG GACACTGGGC ACATCTGGAG
AAGTTCGACG AGTTCAACCG CCTCGCCTTC GATTTCCTGG AAGGAAACCA CCCGTGA
 
Protein sequence
MSSGCPSRTR WCEDAMTTST VIEATAAGLH YHRAGPAGVR PVVLLHGGGP GASAWSNFGR 
TVPVFAERFD TLAVDQPGYG GSENCPSGRQ YFTHAADRLA ALLDEVGLDR VDFIGNSLGG
GTAVRFAVRY PERVGRLLLM GPGGLSLNVF ASDPTEGVKR LAAFGAPPGP SREKLAEFLR
TLVFDQSLVT DELIDERMRA ATDPDALRGM RALGASFADP DLYEEGLLWR DAHRLRNEVL
LVWGREDRVN PLDGALVALK LIRRCRLHVF GGCGHWAHLE KFDEFNRLAF DFLEGNHP