Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2670 |
Symbol | |
ID | 5059133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3004768 |
End bp | 3005664 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640474926 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001159492 |
Protein GI | 145595195 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00899476 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0694304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTTCGG GCTGTCCATC GCGGACGCGA TGGTGTGAGG ACGCCATGAC GACCAGCACA GTCATCGAAG CCACCGCCGC CGGGCTGCAC TACCACCGGG CCGGGCCGGC GGGCGTGCGT CCGGTCGTGC TGCTGCACGG CGGTGGGCCG GGTGCCTCGG CATGGAGCAA CTTCGGGCGG ACGGTCCCGG TCTTCGCTGA GCGATTCGAC ACCCTCGCCG TTGACCAGCC GGGATACGGC GGGTCCGAGA ATTGCCCGAG TGGCCGGCAG TACTTCACGC ATGCGGCCGA CCGGCTCGCG GCCTTGCTTG ACGAGGTGGG CCTGGACCGG GTCGACTTCA TCGGCAACTC GCTCGGCGGT GGCACCGCGG TCCGGTTCGC CGTGCGCTAC CCGGAGCGGG TCGGCCGGTT GCTGCTGATG GGCCCCGGCG GGCTCAGCCT CAACGTCTTC GCCTCCGACC CGACCGAGGG GGTCAAACGG CTGGCCGCGT TCGGCGCACC GCCCGGCCCC AGCCGGGAGA AGCTGGCGGA GTTCCTGCGC ACGCTCGTGT TCGATCAATC GCTCGTCACC GACGAGCTGA TCGATGAGCG AATGCGGGCC GCGACCGACC CGGACGCCCT GCGCGGCATG CGTGCGCTGG GCGCCTCGTT CGCCGACCCG GACCTCTATG AGGAGGGCCT GCTGTGGCGC GACGCCCACC GGCTGCGCAA CGAGGTCCTC CTGGTGTGGG GTCGGGAGGA CCGGGTCAAC CCCCTCGACG GGGCACTGGT CGCGCTCAAG CTGATCCGCC GCTGCCGGCT GCACGTCTTC GGTGGCTGCG GACACTGGGC ACATCTGGAG AAGTTCGACG AGTTCAACCG CCTCGCCTTC GATTTCCTGG AAGGAAACCA CCCGTGA
|
Protein sequence | MSSGCPSRTR WCEDAMTTST VIEATAAGLH YHRAGPAGVR PVVLLHGGGP GASAWSNFGR TVPVFAERFD TLAVDQPGYG GSENCPSGRQ YFTHAADRLA ALLDEVGLDR VDFIGNSLGG GTAVRFAVRY PERVGRLLLM GPGGLSLNVF ASDPTEGVKR LAAFGAPPGP SREKLAEFLR TLVFDQSLVT DELIDERMRA ATDPDALRGM RALGASFADP DLYEEGLLWR DAHRLRNEVL LVWGREDRVN PLDGALVALK LIRRCRLHVF GGCGHWAHLE KFDEFNRLAF DFLEGNHP
|
| |