Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2661 |
Symbol | |
ID | 5059124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2998588 |
End bp | 2999100 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640474917 |
Product | hypothetical protein |
Protein accession | YP_001159483 |
Protein GI | 145595186 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0335597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.13213 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCGGTGG TGCGTCGTGG TGAACTGACC GATGAGGCGT GGGCGGTGAT CGCGCCGCTG CGTCCCCAGC CTGGTGGAGC GCGGGAGCGG TGGCGGGATC ACCGTCAGGT CATCAACGGG ATCTTGTGGA AGCTGCGCAC GGGCGCGCCG TGGCGTGACC TGCCGGAACG CTTCGGGCCG TGGAAGACCT GCCACGAACG GCTGCGCCGC TGGACGGCTG ACGGCACGTG GACCGGATCC TGGCGGCGGC GCAGGTGCAT GACGACGGCA TTCCGGTGCA GTGGACGATC AGCATCGACT CGTCGATCGT GCGGGCGCAC CAGCATGCCG CTGGCGCCCG CAAAGAGGGG GCTCCGCATC AAGTCCGGCG ACGCCTGGTG CGCAAGATGG CGAGGCCATC GGACGATCCC ACGGCGGGCT GAGCACGAAG ATCCACCTCG CCGTCGACGG ACGCGGCCGG CCGCTGTCGA TCCTGCTCAT CTGGCTTCGA TGATCACTCA GGATCCACGT TAA
|
Protein sequence | MPVVRRGELT DEAWAVIAPL RPQPGGARER WRDHRQVING ILWKLRTGAP WRDLPERFGP WKTCHERLRR WTADGTWTGS WRRRRCMTTA FRCSGRSAST RRSCGRTSMP LAPAKRGLRI KSGDAWCARW RGHRTIPRRA EHEDPPRRRR TRPAAVDPAH LASMITQDPR
|
| |