Gene Strop_2606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2606 
Symbol 
ID5059069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2925520 
End bp2926251 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content70% 
IMG OID640474862 
Productcoenzyme A transferase 
Protein accessionYP_001159428 
Protein GI145595131 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGGG CCAGCCGCGC CGAGGTCTGC ATCGTCGCCT GCGCCGAGGC GTGGCGTGGC 
GACGGCGAGA TCCTGGCCAG CGGCATGGGA CTGATCCCCC GCCTGGGCGC CTGGTTGGCT
CGCCACACCT TCGCTCCCGA CCTGGTGCTC AGCGACGGCG AGGCCGAGTT GGTCGGTGAC
GACGGGGCGG AGGGATGGCT TCCCTACCGC GCGGTGTTCG GCATCGTCGC CGCTGGTCGG
CGCCACGTCA TGATGGGTGC CAGTCAACTG GACCGATACG GCAACCAGAA CATCTCCTGC
ATCGGCTCCT GGGCACACCC CACCGCCCAG CTACTCGGTG TGCGCGGCGC CCCGGGGAAC
ACCATCAACC ACCCGACCAG CTACTGGGTG CCACGCCACA GCCGACGGGT CTTCGTGGAC
CGGGTCGACA TGATCTGCGG CATCGGCTAC GACCAGGCCG CTGACCTCGG CTCCCCGGGC
AACCGGTTCC ACGAGATCCG CGTGGTGGTG ACGGACCGGG CGGTCCTCGA CTTCCAGTCA
CCGGATCGCG GGATGCGGTT GCGCTCGGTG CACCCCGGCG TCAGCGTCGA CGACGTCGTG
GCCGCCACCG GCTTCCCGTT GCATCTGCCG GATCAGCTGC CGGAGACCAG AACCCCCAGC
GATCGTGAGC TACGGCTCAT CCGCGAGCAG CTGGACCCGG CCGGGCTGCG AGATCACGAG
CTGGGTCGGT GA
 
Protein sequence
MTGASRAEVC IVACAEAWRG DGEILASGMG LIPRLGAWLA RHTFAPDLVL SDGEAELVGD 
DGAEGWLPYR AVFGIVAAGR RHVMMGASQL DRYGNQNISC IGSWAHPTAQ LLGVRGAPGN
TINHPTSYWV PRHSRRVFVD RVDMICGIGY DQAADLGSPG NRFHEIRVVV TDRAVLDFQS
PDRGMRLRSV HPGVSVDDVV AATGFPLHLP DQLPETRTPS DRELRLIREQ LDPAGLRDHE
LGR