| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2590 |
|---|
| Symbol | |
|---|
| ID | 5059053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2909849 |
|---|
| End bp | 2911075 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640474846 |
|---|
| Product | Dyp-type peroxidase family protein |
|---|
| Protein accession | YP_001159412 |
|---|
| Protein GI | 145595115 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2837] Predicted iron-dependent peroxidase |
|---|
| TIGRFAM ID | [TIGR01412] Tat-translocated enzyme
[TIGR01413] Dyp-type peroxidase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.656112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGGGA GCAGCCCCCG CGCGGTGAGC CGACGCGGTC TACTCACCGG CGGTGCCCTG
GCTGCCGGTG GCGCGCTCGG CGCCGCCGTG GCGGTCACCG CCGCCGGCTC CGACGATCCC
GCGACCCGCC CCGCCGCGAC GACGCCGGTG GCGGAGATCG GGCTCGCCGT CGAACCGTTC
CACGGGACTC GCCAGGCCGG GGTCGCCACC GAACCGCAGG CACACGCGGC GTTCGTCGCG
CTCGTCCTCC GGCCGGAGAC GGACCGGAAG GCGCTGGGAC GGATGCTACG ACTGCTCTCC
GACGACGCCG CCCGCCTCAC CCAGGGCCGT CCCGCCCTGG CCGACACCGA GCCGGAGCTC
GGGCTCCTGC CAGCCCGGCT GACCGTGACC TTCGGTTTCG GTCCCGGTTT CTACCGGGCG
GCCAACCTCG ACGAGCGGCG GCCACCGTCG GTGGCCGCCC TCCCGGCGTT CGGCATCGAC
CGGCTCTCCC CCCGCTGGTC CGGCGGAGAC CTGCTGCTAC AGATCTGCGC CGACGATCCG
CTGACCGTCA CGCATGCCCA GCGGGTGCTG GTGAAGGACA GCCGCCCCTT CGCCACCGTC
GCCTGGGTGC AGCAGGGCTT CCGGCGCGCG GCCGGGGCCG AGCCGGGGCG CACCCAGCGC
AACCTGTTCG GCCAACTCGA CGGCACCGCC AACCCGAAGC CGGGCGCTCC CCTGGAGACC
GCGGTATGGG TGCCAGACGG GCCGACCTGG CTGCGCGACA GCACCACTCT GGTCGTCCGA
CGAATCAGCA TGAACCTGGA GACGTGGGAT CTCCTCGGCC GCACCGACCG GGAGTTGTCC
GTCGGCCGCC GGCTCGACAC CGGCGCGCCG CTGACCGGCA CGGACGAACA CGACGAGCCC
GACTTCACCG CCCTCGGGTC GGGCGGGCTC ACCGTCATCC CGGACTTCTC CCACCTGACC
CGCTCCCATG TTGCCGAGGA CCGGCTCCGG ATTCTGCGCC GCCCCTACAA TTACGATGGC
GTACCCAGCG CCGACGGCAC TGCGGACAGC GGCCTGATCT TCGCCTCCTA CCAGGCCGAC
ATCACCCGTC AGTTCCTACC CATCCAACGA CGGCTGGCCG AACGGGACCT ACTCAACGAG
TGGACCACCC CCATCGGCTC TGCCGTCTTC GCGATCCCAC CCGGCTGCTC CGAAGGCGGC
TGGATCGGCC AGCAACTGCT CGGCTGA
|
|---|
| Protein sequence | MTGSSPRAVS RRGLLTGGAL AAGGALGAAV AVTAAGSDDP ATRPAATTPV AEIGLAVEPF
HGTRQAGVAT EPQAHAAFVA LVLRPETDRK ALGRMLRLLS DDAARLTQGR PALADTEPEL
GLLPARLTVT FGFGPGFYRA ANLDERRPPS VAALPAFGID RLSPRWSGGD LLLQICADDP
LTVTHAQRVL VKDSRPFATV AWVQQGFRRA AGAEPGRTQR NLFGQLDGTA NPKPGAPLET
AVWVPDGPTW LRDSTTLVVR RISMNLETWD LLGRTDRELS VGRRLDTGAP LTGTDEHDEP
DFTALGSGGL TVIPDFSHLT RSHVAEDRLR ILRRPYNYDG VPSADGTADS GLIFASYQAD
ITRQFLPIQR RLAERDLLNE WTTPIGSAVF AIPPGCSEGG WIGQQLLG
|
|---|
| |