Gene Strop_2589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2589 
Symbol 
ID5059052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand+ 
Start bp2909265 
End bp2909852 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content67% 
IMG OID640474845 
Producthypothetical protein 
Protein accessionYP_001159411 
Protein GI145595114 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.436123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAGCA ACGTCACCGG TCGGCACCTA CGCCCGGCCG CCCTGGTCGC CGCCGCCCTG 
CTGACCGCCG CCATGGCCGG TTGCGGCTCG TCCGGCGACT CGTCGGCGAC CAACCCGAAC 
CCATCGACGA CGGCCGTTCC GTCGGCGGAT GCCCCCGCCG GGGTGATCGG TATCAACGAC 
CCGTGGGTGA AGGCCGCCGA CAAGGGGATG ACCGCGGCGT TCGCGACCCT CGTCAACGAG 
AGCGACGCCG ATGTGACCTT GACCGGCGTC AGCACCGAGG TGTCGCCGAT GGAGCTGCAT 
GAGATGGCCA TGAAAGACGG CGAGATGGTC ATGCAGGCCA AGCAGGGCGG CATTGTGATC 
AAGGCGAAGA GCAGCTACGT GCTCGAGCCC GGCGGCGACC ACCTCATGCT GCTGGATCTC 
CAGCAGCCGG TGCAGGCCGG GGATGAGCTG ACCTTCACCC TCGCCTTCGC CGACGGGCGC 
ACCCAGTCGT TCACAGCGGT GGCGAAGCCA TTCACCGGCG CGGAGGAGAG TTACAACCCC 
GAGCACAGTA TGCCGGAAAT GTCCATTAGC CCCAGCGCAG CGTCGTGA
 
Protein sequence
MPSNVTGRHL RPAALVAAAL LTAAMAGCGS SGDSSATNPN PSTTAVPSAD APAGVIGIND 
PWVKAADKGM TAAFATLVNE SDADVTLTGV STEVSPMELH EMAMKDGEMV MQAKQGGIVI 
KAKSSYVLEP GGDHLMLLDL QQPVQAGDEL TFTLAFADGR TQSFTAVAKP FTGAEESYNP 
EHSMPEMSIS PSAAS