| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2588 |
|---|
| Symbol | |
|---|
| ID | 5059051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2908396 |
|---|
| End bp | 2909166 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640474844 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001159410 |
|---|
| Protein GI | 145595113 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5660] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTGTG AGCAGTGGCG CGAGGTGTTG TCGGCGCAGT TGGACGGGGA AGAGACCCCG
GCCGAGCGGG CGGCGGCCGA CTCCCACCTG GCCAGTTGCG GTGCGTGCCG GACGTGGTTT
GACCAGGCGG CGGCGATCAC CCGCCGGGCG CGGCTGTCGG TCAGCGTGAT CGGCCCCGAC
CTCACCGATG CGATCCTGGC CGCGCACCCC GCAACGGCAC CGACGGGGGC GACGATGCGG
CGGCCGTGGC GACAACGGCT GGCACTCGCC CTGCGCGCAG TGCTCGGGCT GACCGGAGCG
TTGCAGGTCA TGCTGGGCCT GACCCAGGTC GGTCAGGCGG CGGCGGGCCC ACACATCCAC
GCCGGCGGCC CACTGGCCTC GGGCCACCTG TGGCACGAGG CAGCGGCGTG GAACATCGCC
GTCGGTGCCG GGTTCCTGTT CGTCGCCGCC CGCCGCACCC CACCGACCGG GCTGCTACCC
ATGTTGAGCG CCTTCGTCGG CACGCTGGTG CTCCTGTCGG TCAACGATGT GATGACCGGG
CGGGTGGAGA CCGCCCGGCT GGTCAGTCAC GGGTTCCTCT TCGTTGGCTA CGCGATCGTC
GTGGTCATGT CCCGGCCGGG CCTACACCCG GACGGCCCAC CCGCCGACCT GCGCACTGAT
CGGCCCCGCT GGCGCATCCC GGCCGAGGAT GAGCCGCCAC CACCGAGTCT GCGGCTCGCG
CCCCCACCGC TTCCGGGTTC GGCGCGCCAT CAAGACAGCG CTGCGGCCTG A
|
|---|
| Protein sequence | MGCEQWREVL SAQLDGEETP AERAAADSHL ASCGACRTWF DQAAAITRRA RLSVSVIGPD
LTDAILAAHP ATAPTGATMR RPWRQRLALA LRAVLGLTGA LQVMLGLTQV GQAAAGPHIH
AGGPLASGHL WHEAAAWNIA VGAGFLFVAA RRTPPTGLLP MLSAFVGTLV LLSVNDVMTG
RVETARLVSH GFLFVGYAIV VVMSRPGLHP DGPPADLRTD RPRWRIPAED EPPPPSLRLA
PPPLPGSARH QDSAAA
|
|---|
| |