Gene Strop_2580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2580 
Symbol 
ID5059043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2900258 
End bp2900833 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content68% 
IMG OID640474836 
Productflavoprotein 
Protein accessionYP_001159402 
Protein GI145595105 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.153426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCG GTCACCTCCA GATCGTCATC TGCGGCGCCG GCCCCGCCAC CAACGCAGCC 
CAACTGGTCA AGGCCGCACA GCACCGATCC TGGACAGCGA CGGTCACCGC CACCCCGAGC
GCGATGAACT TCATCGAACC GCAGCCACTG GAAAGCCTCA CCGGCCAGCC GGTCCGGTCG
ACCTACCAAT CGTCACCCGG CACCCGCCGG TCGCTTCCCG CCACCGACGC CCTGGTCATC
GCCCCGGCGA CCTACAACTC GATCAACAAG ATCGCCCTCG GTCTCGCGGA CAACTACGCC
ATGACCTCCG TCGCCGAGCT GATCGGCAGG CAGGTACCGA CCGTCATCGT CCCGTTCGTC
AACGCCGCCC TCGCCGCGCG GACGCCGTTC CAGCACGCCG TGGCCAGCCT CCGCGACGAG
GGGGTACACG TCCTACTCGG CCCCGACGAC CAATGGGAAC CACACCTGCC CGGCAACGGC
AACGAGCGAC AGAAAGCCTT CCCCTGGACA ACAGCGTTCA CGACAGCGGT CCGGCTCGCC
CACGAACCTC GACGGCCTGC TACCGGCCAC CTTTGA
 
Protein sequence
MTGGHLQIVI CGAGPATNAA QLVKAAQHRS WTATVTATPS AMNFIEPQPL ESLTGQPVRS 
TYQSSPGTRR SLPATDALVI APATYNSINK IALGLADNYA MTSVAELIGR QVPTVIVPFV
NAALAARTPF QHAVASLRDE GVHVLLGPDD QWEPHLPGNG NERQKAFPWT TAFTTAVRLA
HEPRRPATGH L