| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2559 |
|---|
| Symbol | ribA |
|---|
| ID | 5059022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2879801 |
|---|
| End bp | 2880445 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640474815 |
|---|
| Product | GTP cyclohydrolase II |
|---|
| Protein accession | YP_001159381 |
|---|
| Protein GI | 145595084 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0807] GTP cyclohydrolase II |
|---|
| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.300665 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCTA CTGCCACGAT CCGCACCGAG GTCATCGTTC CGTTACGATT TCCCGACGGG
TACGCCACCA CAGCCCGGGT CTACTCCTTC GCTGGCCTGG TGGACGGTCG GGAACACCTG
GCCTTCGGGC TCGGTGACCG GGCTGAACCG GCGGTTGTGC CGGCGGAGCG GTCGGTACCG
CTGGTACGGC CACACAGTGA GTGCCTCACC GGGGATGTGT TCGGCAGCCA GCGCTGCGAC
TGCGGCCCGC AGCTGCGTGA GTCGGTCGAA CGGATCGCCG ACCGTGGCGG CTACCTGCTC
TATCTACGCC AGGAGGGCCG GGGTATCGGC CTGTACGCGA AGTTGGCGGC GTACGCGTTG
CAGGACACCG GGTTGGACAC GTACGAGGCG AACATCGCCC TCGGCCACCA GGCGGACGAG
CGGGACTACA CCGTCGCCGC GCAGATGCTC ACCGCCCTCG GTGTGGACCG GGTCGCACTG
CTCAGCAACA ACCCGGACAA GTCCGCACAG CTGAACCGAC ACGGCATCGC CATCAGCGAA
CGGGTGACCA CCGGGGTCTT CCTCTCCCCG GCCAACGCCG ACTATCTGGC GATCAAGGCG
ACTCACGGCG CGCACACCCT CGACCTGCCC TTCGTACATG ACTGA
|
|---|
| Protein sequence | MHPTATIRTE VIVPLRFPDG YATTARVYSF AGLVDGREHL AFGLGDRAEP AVVPAERSVP
LVRPHSECLT GDVFGSQRCD CGPQLRESVE RIADRGGYLL YLRQEGRGIG LYAKLAAYAL
QDTGLDTYEA NIALGHQADE RDYTVAAQML TALGVDRVAL LSNNPDKSAQ LNRHGIAISE
RVTTGVFLSP ANADYLAIKA THGAHTLDLP FVHD
|
|---|
| |