Gene Strop_2550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2550 
Symbol 
ID5059013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2869221 
End bp2870507 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content66% 
IMG OID640474806 
ProductL-lysine 6-monooxygenase (NADPH) 
Protein accessionYP_001159372 
Protein GI145595075 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3486] Lysine/ornithine N-monooxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.504762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC ACGACTTCAT CGCGATCGGA CTCGGCCCGT ACAACCTGGG ACTGGCCTGC 
CTGACCGAGC CGATCTCCGA GCTGGACGGG CTCTTCCTGG AGGCCCGCGC CGATGTCTCC
TGGCACCCCG GCATGCTGCT GGAGTCCACC CGACTACAGA CGCCGTTCCT CGCCGACCTG
GTGACCTTCG CCGACCCCAC CTCGCCGTAC TCCTTCGTCA ACTACCTGAA GGAGACCGGA
CGGCTCTACC CCTTCTACAT CCGGGAGAGC TTCTTCCCGC TGCGGGTGGA GTACGACGCG
TACTGCCGGT GGGCGGCGGC CCGGCTGTCG AACCTGCGCT TCGGGCACAC CGTCACCACG
GTGGAGTACG ACGAGGCCGA CGGTGAGTAC GTGGTGACCG CGGAGACCGC CGACGGTCCG
GTCACCCACC GGGCTCGGCG CCTGGTGCTC GGCACCGGCA CCCCGCCGGA GCTGCCCGCC
GTCTGTCAGG GCCTCGGTGG GGATGCGATT CACAACTCTC GCTACCTCGA GCACCGCGAC
GCGCTGCGGA GCAAGCGGAG CATCACGATC GTCGGTAGTG GACAGAGTGC CGCCGAGATC
TACTACGAAC TGTTGACGGA TATCGACACC TACGGCTATC AGCTCACCTG GGTGACGCGG
TCGCCCCGGT TCTTCCCGCT CGAGTACACC AAGTTGACGC TGGAGATGAC GTCACCGGAC
TACGTGGACT ACTTCCACGG GTTGCCGGAG GAGACCCGCT ACCGGCTTGA GGGAGAGCAG
AAGGGTCTAC TCAAGGGGAT CAACTCCGAC CTCATCAACA GCATCTTCGA CCTGTTGTAC
GCGCGTAGCA CCGATGGCCC GGTCCGTACT CGGCTGCTCA CCAACACCGA GCTGGTCAGC
GCCGCCCACG ATGCCGGCAC GTACACGTTG GGTCTGCGCC ACCACGAGCA GGGCAGGGAC
TTCACCCTCG ACACCGAGGG CCTGGTGCTG GCCACCGGCT ACCGGTTCCA GGTGCCGGCG
TTCGCCGACG GGATCCGAGA CCGGCTCCGC TGGGACGCCC ACGGCCGGCT CGACGTCGCC
CGTAACTACA GCGTCGACCA CACCGGACAG GAGGTGTTCC TGCAGAACGG TGGTACCCAC
ACGCACAGCG TCACCTCACC TGACCTGGGC ATGGGGCCGT ACCGGAACTC GTACCTCATC
CGGGAGATGC TCGGCCGTGA GTACTACCCG GTGGAGAAGA GCGTCACCTT CCAGGAGTTC
GGGGCTCCGG CGGCGGTGGA TTCGTGA
 
Protein sequence
MTTHDFIAIG LGPYNLGLAC LTEPISELDG LFLEARADVS WHPGMLLEST RLQTPFLADL 
VTFADPTSPY SFVNYLKETG RLYPFYIRES FFPLRVEYDA YCRWAAARLS NLRFGHTVTT
VEYDEADGEY VVTAETADGP VTHRARRLVL GTGTPPELPA VCQGLGGDAI HNSRYLEHRD
ALRSKRSITI VGSGQSAAEI YYELLTDIDT YGYQLTWVTR SPRFFPLEYT KLTLEMTSPD
YVDYFHGLPE ETRYRLEGEQ KGLLKGINSD LINSIFDLLY ARSTDGPVRT RLLTNTELVS
AAHDAGTYTL GLRHHEQGRD FTLDTEGLVL ATGYRFQVPA FADGIRDRLR WDAHGRLDVA
RNYSVDHTGQ EVFLQNGGTH THSVTSPDLG MGPYRNSYLI REMLGREYYP VEKSVTFQEF
GAPAAVDS