Gene Strop_2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2543 
Symbol 
ID5059006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2863112 
End bp2863675 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content68% 
IMG OID640474799 
Productferric-uptake regulator 
Protein accessionYP_001159365 
Protein GI145595068 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.37741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.402703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAGGGC CTGGAGTCAT ATCCTCTTGC AATCGCAAAG CCTGGCTCCG GTGCTGTGGT 
GGGACGCCGT GGGCCGGCTC CGACCCGACG GCGCATAATG GTGGTATGCC GGAGCAGCAT
CCGGCGATCA ACACACGCGA GATGGTAGGG AGTACGGTGC CGCAGACGAT TTCGAAGGCA
ACCCGGAACA CCCGGCAGCG TGCCGAGGTG CTCGCGCTGC TCGGGGAGGT TGACGGGTTC
CACACGGCGC AGCAACTGCA CCGGATGCTC TGCGACCGCG ACGCCCGGGT GGGCCTGACC
ACCGTCTACC GGACCCTCCA ACTCCTGGTC GAAGCCGGTG AGATCGACTC CACCCGGCTG
CCCGGGGGCG AACAGCTCTT CCGCCAGTGC AGCCAGAGCC GTCACCACCA CCACCTGGTC
TGCCGGTCCT GCGGGCGGAC CGTGGAGGTG GCCGGCCCGG CGGTCGAACG GTGGGCCAAC
CAGGTGGCGG CCGAGCACGG CTTCACCGAT GTCGGGCACA CTCTGGAGAT CTTCGGCAAC
TGCGCTGCCT GCGCCGCGTC CTGA
 
Protein sequence
MQGPGVISSC NRKAWLRCCG GTPWAGSDPT AHNGGMPEQH PAINTREMVG STVPQTISKA 
TRNTRQRAEV LALLGEVDGF HTAQQLHRML CDRDARVGLT TVYRTLQLLV EAGEIDSTRL
PGGEQLFRQC SQSRHHHHLV CRSCGRTVEV AGPAVERWAN QVAAEHGFTD VGHTLEIFGN
CAACAAS