Gene Strop_2521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2521 
Symbol 
ID5058984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand- 
Start bp2834230 
End bp2835507 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content77% 
IMG OID640474778 
Productprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 
Protein accessionYP_001159344 
Protein GI145595047 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2241] Precorrin-6B methylase 1
[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.271514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGTA CGTCGGGTGA CGGTCGGAGG AACACCAGCG CAGATGTCGC CGGTGACTCC 
GTCGTCGTCG GAGCGACGGC GGTGACGGTG GCCGGTGTGG ATGCCGCCGG TAACCCGACG 
CACCCGGCCC TCGCCGCCGA GTTGGTGCGG GCGGGGCTGG TGGTCGGTGC GGCCCGGCAC 
CTGACGGCTG CGCCGGTGCG GGCCGGTACG GAGACGGTCG TGCTGGGTCC GTTGTCGCCG 
GCCCTGGAGC GGCTCGCCGC CGCGGTTGCC GCCGGCACCC CGGCCGTCGT CCTCGCCAGC 
GGTGATCCGG GCTGCTTCGG GATCGTGCGG CGGTTGCGGG TGGCCGGGCT GCCGGTGCGG 
GTGTTACCGG CGGTGTCCAG TATCGCCGCC GCCTTCGCCC GGGCCGGGCT GTCCTGGGAC 
GGCGCTGCCG TGGTCAGCGC CCATGGGCGC GACGCCCGGG AGGCGCTCAA CGCTTGCCGG 
GCGCTGCCTC TGGTCGCGGT GCTCACCGCG CCGGGCGCGG GGGCCGCGGA GCTCGGCGCC 
GGCCTGGCGG GTTGGTCGCG TCGCCTGATG GTGGCCGAGC ACCTCGGCAC CGACGCCGAG 
CGGATCACCT GGACGACCCC GGCGGAGGCG GCGGCCGGTA GCTGGACCGA TCCGCACGTG 
CTGCTGAGCC TCGCCCCCGG ACCGATCGGC GCGGCGCGGG TCGACAACCA GCCGGCCGCC 
GCCCCGGCCG GTGGGTGGGC GCTGCCCGAG GGGGCGTATC GGCATCGCGA TTCGATGATC 
ACCAAGGCGG AGGTGCGGGC GCTGGTCGTG GCCGGGCTCC GGCCCCGGCT CGGAAGGCTG 
GTGTGGGACG TGGGTGCCGG CAGCGGCTCG GTGGGCATCG AATGCGCCCT GCTCGGTGCG 
GCGGTCGTCG CCGTTGAGCG GGATTCGGCC GCAGTGGACC TGGTGCGCGG CAACGCCGCT 
CGGCACGGCG TCGATGTACG GGTGGTTCCC GGCGCCGCAC CGGCCGCCCT CGACGGGCTC 
CCCGACCCCG ACGCGGTCTT CGTCGGCGGG GGCGGAACCG GGGTGCTCGC CGCGGTAGCG 
GCCCGTCAGC CGGGGCGGAT AGTCGTCGCG CTCGCCGCGC TGGACCGGGT CGCCCCGGCC 
CGGGACGCGC TGCGGGCCGC TGGTTACACG GTCGAGGGTG TCCAACTCTC CGCCGCCCGC 
CTCGCCGACC TGCCCGGCGG GTCGATCCGT CTCGCGGCCA CCAACCCGGT GGTCGTCCTC 
ACCGGGGAGC GCCTGTGA
 
Protein sequence
MTGTSGDGRR NTSADVAGDS VVVGATAVTV AGVDAAGNPT HPALAAELVR AGLVVGAARH 
LTAAPVRAGT ETVVLGPLSP ALERLAAAVA AGTPAVVLAS GDPGCFGIVR RLRVAGLPVR 
VLPAVSSIAA AFARAGLSWD GAAVVSAHGR DAREALNACR ALPLVAVLTA PGAGAAELGA 
GLAGWSRRLM VAEHLGTDAE RITWTTPAEA AAGSWTDPHV LLSLAPGPIG AARVDNQPAA 
APAGGWALPE GAYRHRDSMI TKAEVRALVV AGLRPRLGRL VWDVGAGSGS VGIECALLGA 
AVVAVERDSA AVDLVRGNAA RHGVDVRVVP GAAPAALDGL PDPDAVFVGG GGTGVLAAVA 
ARQPGRIVVA LAALDRVAPA RDALRAAGYT VEGVQLSAAR LADLPGGSIR LAATNPVVVL 
TGERL