Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2511 |
Symbol | |
ID | 5058974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2820748 |
End bp | 2822181 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640474769 |
Product | polymorphic membrane protein |
Protein accession | YP_001159335 |
Protein GI | 145595038 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.238754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACGT ATCACGACAG CCAGCGACCG CCGCGGGGCC GACAACGGTC CCGACGGCTG CTCGCCGGCG GGCTGGTGGC CGGTGGCCTG GTCGTCGGAG CGGCGGGGCT GGGCGGTTCG GCCGCGGCGT ACGAGCGGGG TGGTGAGAAC GCCGCCGTGG CCCGAGGCGA CTCCGCCGGT GGCCGAAGCG GGGAGTCCCG GGTAACGCCG GTGCCCTGTG ACAGCGCCAA GCTGATCGCC GCGCTGGTCC GGGTCAACGC CGAGGGCGGC GGGACGCTGC GGCTCGCCCC GAAGTGCACC TACACGCTCA CCGATGCCTT CCACCAGCCC GACCAGTACG ACGGCGGAAT CCGGGACGCG CGGGAAGCGG CGGACTCGGC CGAGAACCCC GGCGAGGCCG AGAAGCCGCC CCGGAACCCC GCCGACGACA AGGCAGGACT GCCGGTCATC TACCACCCGG TCACCATCGA AGGCGAGCAG GCCACGATCG AGCGTGCGCG CAAGGCCGAG GCGTTCCGCT TCTTCACTGT CCGTGACGGT GGTGAGCTGA CCCTGCGCAA CGTTCGCCTC GTTGGCGGTC ACTCCGACGC CGAGGGGGGA GCCGTCCACG TGGTGCACGG CGCGTCGGCG TTGATCGAAC GAGTTACGGC GGTGCACAAC ACCTCGTCCT CGATGGAGGG CGGCGGGGGC GCACTGTTCA ACGACGGCAA CATGGTCGTT CGGGACAGCA CGCTCGTCGA CAATCATGCC TACGGATCGG CGGGCAAGGG CGGGGGCCTG CTCAACAACG GCGTGCTGAC CCTGCACTCA TCGACCTTCG CGGGCAACAG TGCCGCCGCC TACGGTGGCG GGCTGGGCAA CTACCAGGCC GCGGCGGAGG TGCACACGAG CACCTTCGAG CACAACTCGG CGGCGCAGGG CGGTGGCCTG GCGAGCTTCT CAGCCCGTAC CCGGGTCTCC GACTCGAAGG TCGTCGGCAA CAAGGCGGGA ACCGGCGGCG GGATCGCGAA CTCGGACGCG CTGATCTTCC TGCGGGGGAT GGAGATCCGG GACAATCTCG CCATCGGCGA CGGCGGCGGC ATCTCCACCT TCCAGGGCCT CGTGCCGCTG GACGAGAGCG TGGTATCTGG TAACACCGCC CACGGCTCCG GCGGCGGCAT CCACGCGGCC AAGTCGAACC TGCTGGTACG GGACAGCACG GTCCGGAGCA ACCACGCCAT CGAGGCGAAG TCCACCGGCG GTGGGATCGC GGTCAGCATG GGTCGGATCG GGCTCTACCG CAGCCTCGTC GTCGAGAACC AGTCAACGCT GCCGGCCGGT GGCCTGAACG TGGATCGGGC GCAGGCGACG CTGGACTCAA AGACCGTGGT GGCGGAGAAC CAACCGACCA ACTGCCTGGG CAGCACCAGT CCGGTGCCAC ACTGCTTCCG GTAG
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Protein sequence | MSTYHDSQRP PRGRQRSRRL LAGGLVAGGL VVGAAGLGGS AAAYERGGEN AAVARGDSAG GRSGESRVTP VPCDSAKLIA ALVRVNAEGG GTLRLAPKCT YTLTDAFHQP DQYDGGIRDA REAADSAENP GEAEKPPRNP ADDKAGLPVI YHPVTIEGEQ ATIERARKAE AFRFFTVRDG GELTLRNVRL VGGHSDAEGG AVHVVHGASA LIERVTAVHN TSSSMEGGGG ALFNDGNMVV RDSTLVDNHA YGSAGKGGGL LNNGVLTLHS STFAGNSAAA YGGGLGNYQA AAEVHTSTFE HNSAAQGGGL ASFSARTRVS DSKVVGNKAG TGGGIANSDA LIFLRGMEIR DNLAIGDGGG ISTFQGLVPL DESVVSGNTA HGSGGGIHAA KSNLLVRDST VRSNHAIEAK STGGGIAVSM GRIGLYRSLV VENQSTLPAG GLNVDRAQAT LDSKTVVAEN QPTNCLGSTS PVPHCFR
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