| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2503 |
|---|
| Symbol | |
|---|
| ID | 5058966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2812672 |
|---|
| End bp | 2814048 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640474761 |
|---|
| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
|---|
| Protein accession | YP_001159327 |
|---|
| Protein GI | 145595030 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.701723 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGCA AGGTACTCAT CGCCAACCGG GGCGAGATCG CGCTGCGGGT GCTGCGAGCC
TGCCGTGAGT TGGGAATCCG TACCGCGGTG GTCTACTCCA CGGCGGACGC CGACTCGACC
GCGGTGCGGC TCGCCGACGA GGCGGTCCTG ATCGGACCGG CAGCGAGTCG CCGCAGCTAC
CTGAACCCCG CGGCCATCGT CGAGGCCGCC CGCCTGGTCG GCGCGCAGGC GGTGCACCCC
GGCTACGGCT TCCTCTCCGA AGACGCCGAC TTCGCCGAGA TCTGCGCCGA CAACGGCCTC
GTCTTCGTTG GACCGCCGCC GCAGGTAGTG GCGGCGCTGG CCGACAAGTC CTCCGCTCGG
GCGTTGATGA GCCGCGCCGG CCTGCCGCTG CCACCGGGCA GCATCGCACC GGTGCCGTCG
GCTGCCGACG CCGCCCGGGT CGCCGCCGAG GTGGGCTATC CGGTGATCGT GAAAGCCGCC
GCTGGGGGCG GCGGTCGGGG GATGACCGTC GTCTCCGCGC CGGCCGAGCT GCCTCGGGCG
TACGCCCGGA CCCGGGCCGC CGCCCAGGTC GCCTTCGGCG ACGACCGGGT GTACGTCGAG
CAGTACCTCG GCAATGCCCG GCATGTGGAG GTGCAGGTGC TCTGCGACGC CCACGGCAAC
GGAGTGCATC TAGGGACCCG GGACTGCTCG GTGCAGCGCC GACACCAGAA GCTCGTCGAG
GAGGCGCCCG CGCCGGCGCT GTCCGCGACC ACTCTGGCCG CCGTCGCCGA CAGTGCGCTG
CGCGGCGCGC TGGAGGTCGG ATTCACCGGT GCCGGGACGG TGGAGTTCCT GGTCGACCCG
GCGGAACAGT TCCACTTCCT GGAGATCAAT TGTCGGATCC AGGTGGAGCA CCCGGTGACC
GAGATGATCA CCGGAATCGA CCTGGTGCAC GAGCAGCTGC ACCTGGCCGC CGGCGGAACG
TTGCGATGGC GGCAGGAGGA GATCGAGACG CACGGGGTGG CGGTCGAGTG CCGGGTCAAC
GTCGAGGACC CCGACCGGGA CTTCGCGCCG ACTCCCGGCC GGCTGGAGCG GTTCGTCCCC
CCGGGTGGTC CCTTCACCCG GGTCGACACC CACGGGTATC CCGGCTACGT CGTCGGTCCC
CACTACGACT CGCTCCTGGC CAAGGTGGCG GTCTGGGCCC CGGACCGGGA GTTGGCCCTC
AACCGGCTGG AACGTGCCCT CGGCGAGTTC GACGTCGCTG GCCCCGGCGT CCACACCACT
ATCCCGTTCG TCCGGCGGGT GCTCGACGAC GCCGCCTTCC GCAAGGGCCG CCACTGCACC
GGTCTGGTCG AGACCCTACT CGGCGACCTG CCCACCCAAT CGAGGAGGAA CGCATGA
|
|---|
| Protein sequence | MFGKVLIANR GEIALRVLRA CRELGIRTAV VYSTADADST AVRLADEAVL IGPAASRRSY
LNPAAIVEAA RLVGAQAVHP GYGFLSEDAD FAEICADNGL VFVGPPPQVV AALADKSSAR
ALMSRAGLPL PPGSIAPVPS AADAARVAAE VGYPVIVKAA AGGGGRGMTV VSAPAELPRA
YARTRAAAQV AFGDDRVYVE QYLGNARHVE VQVLCDAHGN GVHLGTRDCS VQRRHQKLVE
EAPAPALSAT TLAAVADSAL RGALEVGFTG AGTVEFLVDP AEQFHFLEIN CRIQVEHPVT
EMITGIDLVH EQLHLAAGGT LRWRQEEIET HGVAVECRVN VEDPDRDFAP TPGRLERFVP
PGGPFTRVDT HGYPGYVVGP HYDSLLAKVA VWAPDRELAL NRLERALGEF DVAGPGVHTT
IPFVRRVLDD AAFRKGRHCT GLVETLLGDL PTQSRRNA
|
|---|
| |