Gene Strop_2502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2502 
Symbol 
ID5058965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2811956 
End bp2812675 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content68% 
IMG OID640474760 
Productcyclase/dehydrase 
Protein accessionYP_001159326 
Protein GI145595029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.726761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA CTGATGGCCG TCCACTGGCC GCCGACATCA CCGACATCCT GGTAGCCCAC 
TGCGGGCTCA ACGCCGCCGA CGCCGCCCGT GCCCCGGCCG CCTCCCTGGA GGAGCTGGGA
ATGGACTCAC TGGCCCTGCT CGAGCTCTCC GCCGTGGTCG CCGACCGCTG GCAGGTACGC
ATTCCCGAGG AGACCGGCCA GCTCAGCATC GCCGGCGTCG CGGATCTGGT CGCCCGCGGC
GTCGAGCCGG CTGGGCACAC CGAGAACGAC ATCCTGATCG CCGCACCCCT GCCACTGGTC
TGGGAGGTCA CCAACGACGT CGCCGGCTGG CCCGACCTGT TCACCGAGTA CGCGGTGGCC
GAGATCCTGC ACCGGGAGGG GAACACTGTC CGGTTCCGGC TCACCATGCA CCCTGACGAG
AACGGGATCG CGTGGAGTTG GGTCAGCGAG CGTACGGCTG ATCCGGACGG TCGGGAGGTC
CGGGCGCAGC GGGTGGAGCC GGGCCCGTTC GAGTACATGC GGATTCACTG GCGCTACGTC
GAGGAAGCCG GTGGTACCCG GATGATCTGG ACGCAGGACT TCGCCATGAA AACCACCGCC
CCGCTGACCA ACGCCGAGAT GACCGACCGG ATCAACGCCA ACAGCGCGGT GCAGCTCGCG
GTGATCAAAG AGAAGATCGA GCGGCGGGCC GCGCAGGAGA CGGGAGCCGG AGATGAGTGA
 
Protein sequence
MTVTDGRPLA ADITDILVAH CGLNAADAAR APAASLEELG MDSLALLELS AVVADRWQVR 
IPEETGQLSI AGVADLVARG VEPAGHTEND ILIAAPLPLV WEVTNDVAGW PDLFTEYAVA
EILHREGNTV RFRLTMHPDE NGIAWSWVSE RTADPDGREV RAQRVEPGPF EYMRIHWRYV
EEAGGTRMIW TQDFAMKTTA PLTNAEMTDR INANSAVQLA VIKEKIERRA AQETGAGDE