Gene Strop_2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2479 
Symbol 
ID5058942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2787588 
End bp2788529 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content72% 
IMG OID640474737 
Productalpha/beta hydrolase domain-containing protein 
Protein accessionYP_001159303 
Protein GI145595006 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.26249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTGC ATCCTGAGGC TGAGGCGTAC CGGGCGAGCC GTGCGGCGGC CGGCACCCCA 
CCGCTGTACA CGCAGACCCT CGCCGAGGCC CGCGCGGCCG ACCTCGCCGC GATCCGGGCC
GGCTCCGGCC CGGTCGAGCC GGTCCACGAG GTACGCGACG CGTACGTGCC CGGACCGGCC
GGCGACATAC CGGTCCGGGT GTACCGTCCC GCCGGGGCCG GGCCGCTGCC GACACTGCTC
TACTTCTTCG GCGGTGGGTG GACGCTGGGC AGCGTCGACA CCGCGGACGG GGTCTGCCGG
CGTCTGGCCA ACGCGGTGCC CTGCCAGGTG GTCGTTGTCG GCTACCGGCT GGCTCCCGAG
CACCCGTTCC CGGCGGCCGT GCACGACTGT CACGCTGCCC TACGCCACAT CGCGGCGCAT
CCGGCGGAGT TCGACGTAGA TCCGGAGCGT CTCGCGGTCG GCGGGGACAG TGCCGGTGGC
AACCTGGCCG CCGCGGTCAC GCTGCTGACC CAGAAGGACG GCCCCCGGCT GGTAGCGCAG
TTGTTGGTCT ATCCGAACAC CGACCAGACG ATCGATCCGC CGGGCGGCGA GGATCCGCTG
TTGTTCAACC GGCGCTCGGT CGACTGGTAC CGCTCCCATT ACCTGGCCGA CCCGACCGAC
GCCCACCATC CACTCGCGTC GCCGCTACTC GCCGACGACC TGACCGGTCT GCCCCCGGCG
TTCGTGGTCA CCGCTGAGCA CGACCCACTG TGTGCCGAGG GTGAACGGTA CGCCGACCGG
CTCCGCATCG CCGGCGTGCA GACCGTCCTC ACCCGGTACG CGGGCATGGT TCACGGCTTT
TTCACCATGC CCAGCGTCTT CGATGCGGGC CGGCAGGCCC AGGCAGCGGC CGCGACCTTC
CTACGCCGCC GCTTCCGTCG GACGGCGGCC GACGATGGCT GA
 
Protein sequence
MSLHPEAEAY RASRAAAGTP PLYTQTLAEA RAADLAAIRA GSGPVEPVHE VRDAYVPGPA 
GDIPVRVYRP AGAGPLPTLL YFFGGGWTLG SVDTADGVCR RLANAVPCQV VVVGYRLAPE
HPFPAAVHDC HAALRHIAAH PAEFDVDPER LAVGGDSAGG NLAAAVTLLT QKDGPRLVAQ
LLVYPNTDQT IDPPGGEDPL LFNRRSVDWY RSHYLADPTD AHHPLASPLL ADDLTGLPPA
FVVTAEHDPL CAEGERYADR LRIAGVQTVL TRYAGMVHGF FTMPSVFDAG RQAQAAAATF
LRRRFRRTAA DDG