Gene Strop_2474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2474 
Symbol 
ID5058937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2781459 
End bp2783369 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content66% 
IMG OID640474732 
Productheat shock protein 90 
Protein accessionYP_001159298 
Protein GI145595001 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0369006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAGCG AGACGTTGGA GTTCCAGGCT GAGGCACGTC AGCTGCTTCA GCTGATGGTT 
CACTCGATCT ACTCGAACAA GGATGTCTTC CTGCGCGAGT TAATCTCGAA CGCCTCCGAC
GCGTTGGACA AGCTGCGTCT GGCGTCGCTG CGGGACAAGG ACCTCGACGT CGACACTGCC
GACCTGCACA TCGCGATCGA GATCGACCCG GACGCACGGA CCCTGACCGT GCGGGACAAC
GGGATCGGGA TGTCCCGGGA CGAGGTCGTC CAGGTGATCG GCACGATCGC CAAGTCCGGA
ACCGCCGAGC TGCTCCGCAC ATTGCGTGAG TCAGCCGACG CGGAGACGTC GCAGGAGCTG
ATCGGCCAGT TCGGCGTCGG CTTCTATGCG GCGTTCATGG TCGCCGACCG GGTTGTCCTG
GTCACCCGCG AGGCGGGGGC GACCGACGGC ACCCGCTGGG AGTCGAGCGG GGAGGGCACG
TACACGATCG CCTCGGCCAC TGACGCTCCG CAGGGAACGG CGGTCACGCT GCACCTCAAG
CCGGCCGACT CCGAGGACAA CCTGCACGAC TACGCCACCG AGTGGACAGT CCGGCAGATC
GTCAAGCGGT ACTCCGACTT CATCGCCCAC CCGATCCGGA TGGCGGTGGA GCAGCCCGGC
ACCGACGGCG GTGAGTCGAC CACCGAGGTG CAGACACTCA ACTCGATGAA GGCACTCTGG
GCGCGGTCCC GCGACGAGGT CGAACCGGCC GAGTACCACG AGTTCTACAA GCACGTCAGC
CATGACTGGG CCGACCCGCT CGAGGTCGTG CACATGCGGG GGGAGGGCAC CTTCGAGTAC
GAGGCGCTGC TCTTCCTGCC CACGCACGCA CCGCTGGACC TCTTCTCCCC GCAGGGCCGC
CGCGGTGTGC AGCTCTACGT CAAGCGCGTC TTCATCATGG ATGACTGCGA GGCGCTGATG
CCGGGATACC TGCGCTTCGT GAAGGGCGTG GTCGACGCAC ACGACCTGTC GCTCAACATC
TCCCGCGAGC TACTCCAGCA GGACCGGCAG ATTCAGGTGG TCCGCCGCCG CCTGGTCAAG
AAGATCCTCG CCACCGTCAA GGAGCTCAAG GCCAACCAGC CGGAGAAGTA CCGCACCTTC
TGGACCGAGT TCGGCGCTGT CGTCAAGGAA GGGCTGATCG ACGACACCGA GAACCGGGAC
TCTCTCCTGG AGATCCTCTC CGTCGCCTCC ACCCATGATC CGGCCGAGCC GACCGACCTC
GCCGACTACG TCACGCGGAT GAAGGACGGC CAGACTGACA TTTACTACGC CACCGGCGAG
AACCGCAGCA CCATCGAGAA CTCGCCGCAC ATGGAGGCGT TCCGGGCCAA GGGCTTCGAG
GTGCTGCTGC TCACCGACCC GGTCGACGAG GTGTGGGTGG AGCGGGTCGG CGAGTACGAG
GGCAAGACGC TGCGTTCCGT CGCCAAGGGC CAGGTTGACC TGGACACCGA GGAGGAGCGC
TCGGCGGCCG AGGCCGAACG GGAGCGCCAG CGCACCGAGT ACGCCGACCT GCTCACCTGG
CTGAGTAGTA CTCTCGCCGA CCAGGTTCGG GAGGTCCGCC TCTCCGCCCG GCTGACCACC
TCACCGGCCT GCGTGGTGGG TGACGCGCAC GACGTCACCC CGACGCTGGA AAAGATGTAC
CGCGCCATGG GTCACGAGGT GCCGCAGGTC AAGCGGATCC TCGAACTGAA CCCGACGCAT
CCGCTGGTCA GTGGGTTGCG CAAGGCCCGG GAACAGGGTG TCACCGAGGA GTCGCTGAAA
GAGACTGCCG AACTGCTGTA CGGAATGGCG TTGCTCGCCG AGGGAGGCGA ACTGGCCGAC
CCGTCCCACT TCACCCGGAT CCTTGCCGAG CGTCTCGCTC GTACTCTCTG A
 
Protein sequence
MSSETLEFQA EARQLLQLMV HSIYSNKDVF LRELISNASD ALDKLRLASL RDKDLDVDTA 
DLHIAIEIDP DARTLTVRDN GIGMSRDEVV QVIGTIAKSG TAELLRTLRE SADAETSQEL
IGQFGVGFYA AFMVADRVVL VTREAGATDG TRWESSGEGT YTIASATDAP QGTAVTLHLK
PADSEDNLHD YATEWTVRQI VKRYSDFIAH PIRMAVEQPG TDGGESTTEV QTLNSMKALW
ARSRDEVEPA EYHEFYKHVS HDWADPLEVV HMRGEGTFEY EALLFLPTHA PLDLFSPQGR
RGVQLYVKRV FIMDDCEALM PGYLRFVKGV VDAHDLSLNI SRELLQQDRQ IQVVRRRLVK
KILATVKELK ANQPEKYRTF WTEFGAVVKE GLIDDTENRD SLLEILSVAS THDPAEPTDL
ADYVTRMKDG QTDIYYATGE NRSTIENSPH MEAFRAKGFE VLLLTDPVDE VWVERVGEYE
GKTLRSVAKG QVDLDTEEER SAAEAERERQ RTEYADLLTW LSSTLADQVR EVRLSARLTT
SPACVVGDAH DVTPTLEKMY RAMGHEVPQV KRILELNPTH PLVSGLRKAR EQGVTEESLK
ETAELLYGMA LLAEGGELAD PSHFTRILAE RLARTL