Gene Strop_2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2472 
Symbol 
ID5058935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2780074 
End bp2780925 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content69% 
IMG OID640474730 
Productpyridoxamine kinase 
Protein accessionYP_001159296 
Protein GI145594999 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase 
TIGRFAM ID[TIGR00687] pyridoxal kinase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.11568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAATCC TGTCTATCCA GTCGTCGGTT GCCTATGGCC ACGTCGGCAA CTCGGCCGCC 
GTCTTTCCGC TGCAACGCCT CGGGCACGAG GTGTGGCCGG TGTTGACGGT CCACTTCTCC
AACCACACCG GCTACGGCGC ATGGCGTGGG CCACTGCTGG CACCCGCGGA TGTCGCCGAG
GTCATCGCCG GCATCGCCGA CCGGGGAGTT CTCGCCCAAG CCGACGCGGT GCTCTCCGGG
TACCAGGGCG ACCCGGCGAT GGGTGAGGTG ATCATCGATG CGGTTCGCCG GGTGAAAGCC
GTCAACCCCG CCGCCGTCTA CTGCTGTGAC CCGGTGATGG GGGACGTGGG CCGGGGGATG
TTCGCTCGCC CCGGCATCCC GGAGTACCTG CGCGACGTGG TCGTACCGAA CGCGGACATC
ATCACCCCGA ACCAGTTCGA GCTGGAGTAT CTCGCCGGCG GTCGGACGGA GACGCTGGCG
GAGCTGCTCG GGGCGGTCGA CAAGGTGCGG GCGACCGGAC CACAGCACGT ACTGGTCACC
AGCGTGCTCC ACCGGGACCT GCCCGAGGAG CAGCTTGAGC TGGTGGCCGT CTCCGAGGAG
GGCGCCTGGG CGGTGACCAC ACCGATGCTG CCGATCAGCC CGAACGGTGG CGGTGACGTC
ACGGCCGCGC TCTACCTCGC ACACCTGTGG ACCACCGATT CACCCGCGAC CGCGCTGGAG
CGCACCAGCG CAAGCATCTT CCGGGTCTTC GAGGCCACGT TGGCGGCGGG TACCCGGGAG
CTCCAGCTGG TCGCGGCCCA GGAGTCGATC GCGAGCCCAC CGCCGGGCTT CACCGCCCGC
CGACTGCGCT GA
 
Protein sequence
MRILSIQSSV AYGHVGNSAA VFPLQRLGHE VWPVLTVHFS NHTGYGAWRG PLLAPADVAE 
VIAGIADRGV LAQADAVLSG YQGDPAMGEV IIDAVRRVKA VNPAAVYCCD PVMGDVGRGM
FARPGIPEYL RDVVVPNADI ITPNQFELEY LAGGRTETLA ELLGAVDKVR ATGPQHVLVT
SVLHRDLPEE QLELVAVSEE GAWAVTTPML PISPNGGGDV TAALYLAHLW TTDSPATALE
RTSASIFRVF EATLAAGTRE LQLVAAQESI ASPPPGFTAR RLR