| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2469 |
|---|
| Symbol | |
|---|
| ID | 5058932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2777106 |
|---|
| End bp | 2777726 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640474727 |
|---|
| Product | Sua5/YciO/YrdC/YwlC family protein |
|---|
| Protein accession | YP_001159293 |
|---|
| Protein GI | 145594996 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0137096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGGT ACTACGACGT GCACCCGGAC AACCCCCAGC CCCGAATCCT GCGGCAGGTC
GTCGGACTCG TCCGGGACGG TGGCCTCATC GCCTACCCCA CCGATTCCTG CTGTGCGCTC
GGCTGCCAGC TGGGCGACCG CCGCGGGCTG GACCGGATCC GTGACATTCG CCGGCTCGAC
GAGCGGCACC ACTTCACGTT GGTCTGTCGG GACTTCGCGC AGCTGGGTCA GTTCGTGCAG
ATCAGCAACG CGGTGTTCCG GTTGGTCAAG TCCTGTATCC CGGGCAGCTA CACCTTCATT
CTGCCGGCTA CCCGTGAGGT GCCGCGACGG ATGTTGCATC CGCGGAAGCG CACCGTTGGG
GTACGGGTGC CCGACCACGC CGTCGCCCAG GCGTTGCTGG CCGAGCTCGG TGAGCCGATG
GTCTCCAGCA CCCTGATCCT GCCCGGGGAG GAGGAGCCGT TGACCCAGGG GTGGGAGATC
AAGGAACGGT TGGACCACGT GCTCGACGGC GTGGTGGACG CAGGCGACTG TGGCAAGGAG
CCGACGACCG TGGTCGACCT GTCGGGCGAT GAGCCAGAGG TGCTACGTCG TGGCGCGGGG
GACCCGTCCC GCTTCGAGTA G
|
|---|
| Protein sequence | MARYYDVHPD NPQPRILRQV VGLVRDGGLI AYPTDSCCAL GCQLGDRRGL DRIRDIRRLD
ERHHFTLVCR DFAQLGQFVQ ISNAVFRLVK SCIPGSYTFI LPATREVPRR MLHPRKRTVG
VRVPDHAVAQ ALLAELGEPM VSSTLILPGE EEPLTQGWEI KERLDHVLDG VVDAGDCGKE
PTTVVDLSGD EPEVLRRGAG DPSRFE
|
|---|
| |