| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2463 |
|---|
| Symbol | glpK |
|---|
| ID | 5058926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2770527 |
|---|
| End bp | 2772044 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640474721 |
|---|
| Product | glycerol kinase |
|---|
| Protein accession | YP_001159287 |
|---|
| Protein GI | 145594990 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0554] Glycerol kinase |
|---|
| TIGRFAM ID | [TIGR01311] glycerol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.291401 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATT TCGTTGGTGC GGTGGACCAG GGCACCACCA GTACCCGTTT CATGATTTTT
GATCATGGTG GTAACGACAT GGGTCACCAC CAGCTCGAGC ACCAGCAGAT TCTGCCGCGG
CCCGGTTGGG TCGAACACAA CCCGGTGGAG ATCTGGGAGC GGACCCAGAC CGTCATCCAG
ACGGTGCTCT ACGAGCATCG CTTGGCCGTC ACCGACCTCG CGGCGCTTGG GATCACCAAC
CAGCGGGAGA CCACCGTGGT GTGGAACCGG CGCACCGGCC GGCCCTACCA CAACGCGATC
GTGTGGCAGG ACACCCGGAC CGACCGGATC GCTTCGGCGT TGGAACGCTC GGGCCGGGGA
GACGTCATCC GTCGTAAGGC CGGCCTGCCC CCGGCGACGT ACTTCTCCGG CGGCAAGATC
CAGTGGATTC TCGAGAACGT GGACGGGGTC CGGGAGGCGG CCGAGCGTGG GGAGGCCATC
TTCGGTAACA CCGACACCTG GCTGTTGTGG AACCTGACCG GCGGCACCGC GGGCGGCGTG
CATGTCACCG ATCCGACCAA CGCCAGTCGT ACCATGCTGA TGAACCTGGA GACGCTGGAC
TGGGACGACG AGCTGCTGTC GTTTTTCGAC ATTCCCCGCG CGATGGTGCC GCGGATCCGG
CCGTCGTCCG ACCCGGACTC GTACGGTGTC ACCGCCGCCC ATGGCCCGTT CACCGGCTCG
GTCCCGCTCA CCGCGGATCT CGGCGATCAG CAGGCGGCCA CCGTCGGTCA GGTCTGTTTC
GCTGCCGGAG AGGCCAAGAA CACCTACGGT ACGGGCAACT TCATGTTGCT CAACACCGGC
ACGGAGATCG TCCGTTCCCA GGCGGGGCTG CTCACCACCG TCTGCTACCA GTTCAGCGAC
CAGGCGCCGG TGTACGCGCT GGAGGGCTCG ATCGCCGTCA CCGGTTCGGC CGTGCAGTGG
CTACGCGACC AGCTGAAAAT CATCAACACC GCAGGGCAGA GCGAGATGCT GGCCCGCCAG
GTGGACGACA ACGGCGGGGT GTACTTCGTG CCCGCCTTCT CGGGCCTGTT CGCCCCGTAC
TGGCGCTCCG ATGCCCGCGG CGTGATCGTT GGCCTGTCCC GGTTCAACAC CGACGCCCAC
ATCGCCCGGG CCACCCTCGA GTCGATCTGC TACCAGAGCC GAGACGTCGC CGAGGCCATG
GCCACGGACT CCGGCGTACC ACTGGAGTGT CTCAAGGTCG ACGGCGGCGT CACGGTCAAC
GACCTGTGCA TGCAGTTGCA GGCCGACATC CTCGGGGTGC CAGTAAGCCG GCCCGTGGTC
GCCGAGACCA CCGCACTCGG CGCCGCCTAC GCCGCCGGCC TCGCCGTCGG ATTCTGGCGC
AGCACCGACG AGCTCCGCGA GAACTGGAAC GAAAGCCGCC GCTGGCAGCC CACCTGGCCG
TCGGAGCAAC GCGAGGCCGA GTACGAACGC TGGAAACGGG CCGTCCAACG CACCCTCGAC
TGGGTCGATC TCGACTGA
|
|---|
| Protein sequence | MADFVGAVDQ GTTSTRFMIF DHGGNDMGHH QLEHQQILPR PGWVEHNPVE IWERTQTVIQ
TVLYEHRLAV TDLAALGITN QRETTVVWNR RTGRPYHNAI VWQDTRTDRI ASALERSGRG
DVIRRKAGLP PATYFSGGKI QWILENVDGV REAAERGEAI FGNTDTWLLW NLTGGTAGGV
HVTDPTNASR TMLMNLETLD WDDELLSFFD IPRAMVPRIR PSSDPDSYGV TAAHGPFTGS
VPLTADLGDQ QAATVGQVCF AAGEAKNTYG TGNFMLLNTG TEIVRSQAGL LTTVCYQFSD
QAPVYALEGS IAVTGSAVQW LRDQLKIINT AGQSEMLARQ VDDNGGVYFV PAFSGLFAPY
WRSDARGVIV GLSRFNTDAH IARATLESIC YQSRDVAEAM ATDSGVPLEC LKVDGGVTVN
DLCMQLQADI LGVPVSRPVV AETTALGAAY AAGLAVGFWR STDELRENWN ESRRWQPTWP
SEQREAEYER WKRAVQRTLD WVDLD
|
|---|
| |