| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2461 |
|---|
| Symbol | |
|---|
| ID | 5058924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2766698 |
|---|
| End bp | 2768329 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640474719 |
|---|
| Product | 4-phytase |
|---|
| Protein accession | YP_001159285 |
|---|
| Protein GI | 145594988 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.792128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGGGA AACTCCTGAA AGTGGTAGTC GCGGCGACCG CTACCGCCAT GTTGGCCACC
GCCTGCACCG GCAGCGGCAA CGACCCAGAG GAAGGTAACG ATCAATCTGG CGGTAAACTG
CGGGTCTACG CCTCAGAGCC GGCGTACCTG CTGCCGTCGA ACGGCGACGA CGAGCCGTCG
ATCTACGTGA TCCGTCAGCT CTACCGCGGT CTGGTCAAGT ACAACGCCGA AACTGGTGAT
GCGGAGATGG ATCTGGCCGA GTCGATCACC TCGGACGACC AGAAGCTCTG GACGATCAAG
CTGAAGGACG GCTACACCTT CGACAACGGT GAGCCGGTCG ACGCCGACTC CTTCATCCGG
TCGTGGAACT TCGCCGCCTA CGCGCCGAAC GCCCAGAACA ACGGCTACTT CATGAAGCGG
ATCGCCGGTA TCGACGAGGT CCTGCCCAAG GACCCGGACG GCGAGGGCCC GGCGGAGGCC
CCGGCACCGT CGGTCGAGAC GATGTCCGGC CTGACGAAGG TCGACGACCT CACCTTCACC
GTCGAGCTCA AGGAGCCCTT CACCGGCTTC CCGACCATTG TCGGGTACTC GGGCTTCTTC
CCGATGGCCC AGGCCTGCGT CGACGACGCG GATGCCTGCA ACGAGACCCC GATCGGTAAC
GGCCCTTACA AGATCGACGG TAGCTGGGAA CACGACATCG AGATCAACCT GGTCCGCAGC
GACACCTGGA AGGGCGAGCC GGGCAAGCCC GACGAGATCT ACTACCGGAT CTTCGCCGAC
GTGGACGGCG CCTACGCCGC CTTCCAGGCC GGCGAGCTGG ACGTGATGTA CACGATCCCG
CCGGCGCGCT TCAAGGACGC CAAGGCCAGC TACGGCGACC GGCTGTACGA GCAGGAGGGC
GACAGCCTCA ACTACGTCGG CATGCCGCTG TACGACGACA GCTTCAAGGA CAAGCGGATC
CGCCAGGCAT TCTCGCTGGC GATCGACCGG CAGTCCATCA TCGACGCTGT CTTCGACGGA
CGGTACACCC CCGCCACCGG CTTCGTCGCG CCGATCTTCG AGGGCGCTCG CGAGGGTATC
TGCGCCTACT GCGAGAAGGA CGTCGAGAAG GCCAAGGAAC TGCTCGCGGC GGCCGGTGGC
TGGCCGGAGG GCAAGAAGCT GACCCTGTGG GCCAACGCGG GTGCTGGCCA CGACGCCTGG
CTCCAGGCCG TCGGCGACCA GATCAAGGCC GCACTGGGCA TCGACTACGA GCTGAAGGTC
AACCTGCAGT TCGCCGAGTA CCTGGACGTG GCGGACAACC GGGAGTTCAC CGGCCCGTTC
CGGCTCGGCT GGGGTCCGGA CTACCCGTAC GTGGAGACCT ACCTGACTCC GCTGTACAGC
ACCGGCGTCG ACAGCAACAA CAGCACCTTC AGCAACCCCG AGTTCGACAA CCTGCTGAAG
CAGGGCGACG CCGCTCCGAC CATGGAGGAG GCCATCACCT TCTACCAGCA GGCTGAGGAC
ATCCTGGCCG AGGAGATGCC GGTCATCCCG ATGTTCTGGC GCAAGGAAGC GGCGGTCTAC
AGCGAGAACG TCGACACCTT CGTCTGGAAC CAGGTCTCCG GCGCCGCCTA CGGTGCGATC
TCCCTGAAGT AG
|
|---|
| Protein sequence | MHGKLLKVVV AATATAMLAT ACTGSGNDPE EGNDQSGGKL RVYASEPAYL LPSNGDDEPS
IYVIRQLYRG LVKYNAETGD AEMDLAESIT SDDQKLWTIK LKDGYTFDNG EPVDADSFIR
SWNFAAYAPN AQNNGYFMKR IAGIDEVLPK DPDGEGPAEA PAPSVETMSG LTKVDDLTFT
VELKEPFTGF PTIVGYSGFF PMAQACVDDA DACNETPIGN GPYKIDGSWE HDIEINLVRS
DTWKGEPGKP DEIYYRIFAD VDGAYAAFQA GELDVMYTIP PARFKDAKAS YGDRLYEQEG
DSLNYVGMPL YDDSFKDKRI RQAFSLAIDR QSIIDAVFDG RYTPATGFVA PIFEGAREGI
CAYCEKDVEK AKELLAAAGG WPEGKKLTLW ANAGAGHDAW LQAVGDQIKA ALGIDYELKV
NLQFAEYLDV ADNREFTGPF RLGWGPDYPY VETYLTPLYS TGVDSNNSTF SNPEFDNLLK
QGDAAPTMEE AITFYQQAED ILAEEMPVIP MFWRKEAAVY SENVDTFVWN QVSGAAYGAI
SLK
|
|---|
| |