| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2460 |
|---|
| Symbol | |
|---|
| ID | 5058923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2765382 |
|---|
| End bp | 2766218 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640474718 |
|---|
| Product | abortive infection protein |
|---|
| Protein accession | YP_001159284 |
|---|
| Protein GI | 145594987 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.112668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTGT TGAAGCAGCT TGGAGTCGTC ATGGCGGTTG CCCTCGTCGG CGGTCTGGGC
GTTGCCGCGG CCACCGGTAG TGCGTTGTTG ACGTTGGCCC TCGGCATCGC GACGGCCGTG
CTCGCGGTGT TCGCGTACGG GTGGGTGGTG CGTCGGACCG AACGCCGTGT GCCCGTGGAG
GTGGCCCTGA CCGGAGCTGG TGCCGCGACT CGTCGAGGGA TGCTGATCGG TGTCGGGATG
TTCGCGGTCG TCCTCGGCGG TATCGCGCTG TTCGGCGGCT ATCGGGTTGC CGGCTGGGGC
TCCCCGGCCG GCATGGTGAC GCTTTTCGGT ATCATGGCCG GCGCCGCCGT GACGGAAGAA
TTGATCTTCC GGGGCATTCT GTTTCGGATT GTTGAGCAGC GATTCGGGAC ATGGAATGCG
TTGACCCTGA CCGGCTTGCT GTTCGGGCTG TCGCATCTGT TCAATCCGAA CGCCAGTGTG
TGGAGCTCGG TCGCCATCGC GATCGAGGCC GGCGGAATGC TCGCCGCCGC CTATGCCGCC
ACCCGCACGC TGTGGGTGCC GATCGGGCTG CACTTTGGCT GGAACTTTGC CCAGGCCGGG
CTCTTCGGCG TTGCGGTATC GGGTAGTAGT GAGCCGGCGG GGCTACTGGA GGGCGTGATG
TCGGGGCCGG TCGCGGTCAG TGGCGGCGAG TTCGGGCCGG AGGCCAGCCT GTTTGCCGTG
CTCGCCGGTG CCGGGCTGAC TATCGTGTTC ATGTGGCTGG CCCGCCGGCG TGGCGGGATC
GTGCCCGCTG CCCGGCGCGC GAACGCGGCC GGTGCGGTCG CTAGGCTGCC GCGATGA
|
|---|
| Protein sequence | MRLLKQLGVV MAVALVGGLG VAAATGSALL TLALGIATAV LAVFAYGWVV RRTERRVPVE
VALTGAGAAT RRGMLIGVGM FAVVLGGIAL FGGYRVAGWG SPAGMVTLFG IMAGAAVTEE
LIFRGILFRI VEQRFGTWNA LTLTGLLFGL SHLFNPNASV WSSVAIAIEA GGMLAAAYAA
TRTLWVPIGL HFGWNFAQAG LFGVAVSGSS EPAGLLEGVM SGPVAVSGGE FGPEASLFAV
LAGAGLTIVF MWLARRRGGI VPAARRANAA GAVARLPR
|
|---|
| |