Gene Strop_2453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2453 
Symbol 
ID5058916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2758218 
End bp2758955 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content70% 
IMG OID640474711 
Producthypothetical protein 
Protein accessionYP_001159277 
Protein GI145594980 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.680922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.545712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCGAA ACGGCGGTCC GGATTCGCCG ATCAGACGGG GTCAGATCCG GGCCGCGGCA 
AGGCGCTCCT CGAGCCTCCC ACGCCCTGCC CTCAAGCTGC TGACGCCGGC CGCGCGGGCC
GGCGTCGTCG CCATCATCGG CGACCGGCTG ACATTCCGCC ACCCGGTCGT CACGCGAGTG
CTGCATGAGG GAACGGCCAG CGCGCTACGA GTCCTGCTGC ACCGCTCCTT CGCCGAGCGC
ATAGCAGGCG CCGGTGGGCC ACCCGAGCGG GTCGTCACCC AGTTACTCGC TGACACGGTG
CCGTTGGACG TCACGCTGAC CCGCTGGCTC ACCACTCACG TCGAGCAGCT CACCACCCGC
GCACCCCGGA TCACAGTGAC CATCCTGCAA CGTGCCCACG CCCAGTGCAC AGTGCCGCCC
GCCGACCGCA TGACCCTCAC CATCTGGCTG GCCCGGCTGC TCCTGCGGTT GGGCCGCAAC
TGCGCCGCCG AGGCCGGGTG GGTTGCCTCC CGCACCGATG ACCTCGACGT GGAAGGTGAG
ATGCGGTGGA TGGTCGCCCT GACCTATGAG AAGCGCGGCG AGCACCAGAC CGCCGCGGAC
ATCGCCCGAT CCGTGCTGCA CGACCGCCGT GTCCCGGCTC CGTGGCTCGA CCGGTTTCGC
CTCATGCAGG CTCGGCTGAG CCAACACCTG GCCGACCGAC ACGACGACTG TCACCCCGAA
ATCGACATGT GTACGTAG
 
Protein sequence
MSRNGGPDSP IRRGQIRAAA RRSSSLPRPA LKLLTPAARA GVVAIIGDRL TFRHPVVTRV 
LHEGTASALR VLLHRSFAER IAGAGGPPER VVTQLLADTV PLDVTLTRWL TTHVEQLTTR
APRITVTILQ RAHAQCTVPP ADRMTLTIWL ARLLLRLGRN CAAEAGWVAS RTDDLDVEGE
MRWMVALTYE KRGEHQTAAD IARSVLHDRR VPAPWLDRFR LMQARLSQHL ADRHDDCHPE
IDMCT