| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2441 |
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| Symbol | |
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| ID | 5058904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2743318 |
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| End bp | 2744877 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640474700 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001159266 |
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| Protein GI | 145594969 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0616003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGACTC GGCAACCTGG CCCCGCACGA CGAAGCCACG GCGCGATGAG CAACGCTTCA
GCGACCGCCG CGCCGGCGCC AGTAGACCTC CCCGTCGCGA TCGGCAAGGT GCCGCACCGC
TGGCTGATTC TCGCGATCCT CTGCCTGACC CAACTCGTCG TGGTGCTGGA CAACACCGTG
TTGACGGTGG CGGTTCCGGT ACTCACCGTA GAGCTCGACG CCGGCACCGC CGACGTTCAA
TGGATGATCA ACGCGTACGC GTTGGTGCTG TCCGGGCTGC TGCTCAGCGC TGGCAGCGCG
GTAGACCGGT ACGGGCGGCG GCGGATGTTG CTGGTCGGGC TGGTGCTGTT CGGCGTGGGC
TCACTGGCGG CCGGCCTCGC CCGTACCTCC GAGCAGTTGA TCGCCGCCCG GGCCGGCATG
GGCGTGGGGG GCGCCCTGCT GGTGACCGCC ACCCTCGCCC TCGCCATGCA GGTCTTCGAC
TCCGCCGAGC GATCCCGGGC AATCGGCATC TGGGCGGCGA CCAGCGCGCT GGGCTTCGCC
GCCGGGCCAC CGATCGGTGG GATCGTCCTC GCCCACCTGC CCTGGGGCGC GATCTTCCTG
ATGAACATCC CGATCGTGCT GGTCTGTCTG CTCGCCGGCC GGGCGCTGAT CCCGGAATCA
CGCAACCCGG CCAGCGGCCG CCTCGACCTG ATCGGAGTGG CCCTCTCCAC CGTCGGCCTG
ACCGCGATCG TCTGGGCGAT CATCTCCGGT CCGGAGCTCG GCTGGGCCTC GACGAAGGTC
CTCGGCGCCG GCGCCGCCGG CGTGCTGCTG CTGGGGCTCT TCGTCCGCTG GGAGCAGCGG
GTCGCCCACC CGATGCTGGA CATGCACTTC TTCCGGAACC GCCGCTTCGT CGGCGCGGTC
TGCGGCGTGG TGCTGATCAC TTTTGGCGCC ACCGGCGCGC TCTTCCTTCT CACCCAGCAC
CTGCAGTTCG TCCGCGGCTA CCCCGCCTGG GAGGCCGGGC TACGGATGGT GCCGTTCGCG
CTCTCCATCG TGGTGCTCAA CGTTGCCGGC GTCGCCACGC TGGCGATCCG CCGGCTCGGG
CTGCCCGCCG CCATCGCCAC CGGAATGACC CTGCTCGCCG GCGGGCTGGC GCTGGTTACG
CACGTCCCCT CCGAGGGCTA CGGCACGCTA CTGGCCGGGC TGCTCATCAT GGGTACGGGC
TGCGCGCTGG CGAACCCGGC CATCGTTGAG GCGGTGATGA GCGCGATCCC CACGGACAAG
GCTGGCGCCG GGGCCGGCGT TGACGGCACC ATGACCGAGG TTGGCAGCAG TCTCGGCATC
GCCGTGCTGG GTGCGGTGCT CAACGCCCGC TTCGCCGCGC TGCTGCCCGC CGCACTGGCC
GGCGCCGGCT CGTTCCCCGC GGCCCTGGCC GCGGCGGGCC CGGACCGGGA GGCGGTCACC
GCCGCCTTCG CCGACGCGTT GCGCACCGGT CAGACGGTGG GGGCGGTGGC CGTCCTGGTC
GGCGGCCTCG TCGCCGCCGC GCTGTTGCAC CGCGCCGACC GCATCTCCGC CCGGAGTTGA
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| Protein sequence | MPTRQPGPAR RSHGAMSNAS ATAAPAPVDL PVAIGKVPHR WLILAILCLT QLVVVLDNTV
LTVAVPVLTV ELDAGTADVQ WMINAYALVL SGLLLSAGSA VDRYGRRRML LVGLVLFGVG
SLAAGLARTS EQLIAARAGM GVGGALLVTA TLALAMQVFD SAERSRAIGI WAATSALGFA
AGPPIGGIVL AHLPWGAIFL MNIPIVLVCL LAGRALIPES RNPASGRLDL IGVALSTVGL
TAIVWAIISG PELGWASTKV LGAGAAGVLL LGLFVRWEQR VAHPMLDMHF FRNRRFVGAV
CGVVLITFGA TGALFLLTQH LQFVRGYPAW EAGLRMVPFA LSIVVLNVAG VATLAIRRLG
LPAAIATGMT LLAGGLALVT HVPSEGYGTL LAGLLIMGTG CALANPAIVE AVMSAIPTDK
AGAGAGVDGT MTEVGSSLGI AVLGAVLNAR FAALLPAALA GAGSFPAALA AAGPDREAVT
AAFADALRTG QTVGAVAVLV GGLVAAALLH RADRISARS
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