| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2428 |
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| Symbol | |
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| ID | 5058891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2724122 |
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| End bp | 2726047 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640474687 |
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| Product | hypothetical protein |
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| Protein accession | YP_001159253 |
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| Protein GI | 145594956 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1944] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.149205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGCA CCGCGGCGGC GTACCCCACC CCGCTCGCCG CCGCGGCGGC CCACCTCCGA
CAGCACCTGC ACCGCCGTTG GCTGGCGCAG CCGTTCGGCC GGGCACCGCG GGTAGTGACG
TTGGGCGACG TTGACGTGCC CGCCGCGGCC GATCCCGACC GGTGCGACGC CACCGTGCAC
CTCACCGCCG CCACCGTGCT GATCGGACCG ATTGGCAGCG CGGCGGGCCG GGCCTGCGGG
CACTGCCTGG CCATCCGATG GCAGCGGCTG CGTACCCGGA GCCAACGTGA CGCCCTGGAA
GTCGGTGGCC AGACGACCGC GGTCGGCCCG TGGCCGCAGC TGACCACCTA CCATCTCGAC
GCCGCCTGGG AGCTCCACCG CGCCAGTCAC ACCAGCCCAC CACCGCCGCC GCCACCGAGC
TGGGACCGGC ACAGCACCCC GCTGCCCCGG ATCAGCCAGC TCGACCTGGC CAGCCTGCGG
GTACGTACCT ACCCGGTGCT GGCCGAGCCG TGCTGCCCCA GCTGCACCCG TCAACGACCC
GACACTCCCG ACCCGCTGGT GCTCGCGCAC CACCCCCGGC CCAAGCCACG CCCCGACGCG
TACCGGCTGA GCGCCCCCGA CGGCTATCCG CTGCCAGCGG CCGCGCTGGT CAACCCGGTC
TGTGGCGTGC TGGGTGCGGG TACTGCGCTC ACCATCACCT CACCGACCAC AGCACCGGTG
ACCGGCAGCG TCTTCATTCG CGGCTACGGC GGGCTGCTCG ACGTCTCCTG GAGCGGCCAG
TCCAGCGGCT ACGACGCGAG CCGCTCGCTG GCCTACCTCG AAGGACTGGA GCGCTACGCG
GGGACCCACC GCCGGCGCAA CGTCACCCCG GTCATCGCCG CGTACGCCGA CCTCGGCCCG
GACGCGTTGC ACCCGGACCG CTGCGGCCGC CACCCCGACG AGGTGTACGA CACCGACCCG
ATCCTGCGCC GGTTCGACCC ACAACGACCG ATCCCCTGGG TGTGGGGTCA GAACCTGCAC
ACCGGCAAGC CCGTGCTGGT GCCGCGCCGG CTGTGCTTCT ACAGCTCGCC CGCCGCCGGT
GACACCTTCG TCCTCTCCTC CTCCAGCGGC TGCGCCACCG GCAGCTGCCG GGAGGAGGCC
GCCCTGTTCG GCCTGTTGGA ACTGATCGAG CGTGACGCGT TCCTCCTCGC CTGGTACGGC
AACCTGACCC TGCCCCGGAT AGACCTCGAC ACCTGCCCAC CGGTGGTGCG GGCGTTGGTC
GATCGCGCCG AGCTACAGGG CTACCGTCTC TACGCCTTCG ACAACCGCAT CGACCTCGAC
GTACCCGTGG TCACCAGCCT CGCGGTCCGG CACGACGGCG GTCCCGGTCT GTTGTCGTTC
GCCGCCGCGG CCCACGTCGA CCCCCAGCAG GCGGTCACCG GCGCGCTCGC CGAGGCGCTC
ACCTACATCC CGCACCAGCC CGCCACGGTG CGCCGACGTC GGGCCGAGCT GGAACGGATG
GCCGACGACT ACACCCTCGT CCGCCGGCTG CCGGACCACT CGGCGCTGTT CGGCCTACCC
CGGATGGCGG TGCACGCCGG AAGCTACCTC AACGACCGTG GCGCGCTCCC CATCGAGCAG
GTGTTCGCCG GCTACCGAAC CCCCGGCACA CCGGACCTCC GCGACGACCT GCGCCGGGTG
CTCGACCTGC TGAGTGCGCG CGGGCTTGAG GCGATCATGG TGGACCAGAC CACACCAGAA
CAGGAGGCGA TCGGACTCCG CTCGGTCTGC ACCGTCGTGC CCGGCCTGCT TCCGATCGAC
TTCGGCTGGA TCCGACAGCG GGCTCCGCAC CTGCCGCGGC TGCGGACCGC GCCCGCGGTG
GCGGGCCTCG TCGACGCGGA ACTGACCGAC GCCGACCTCC GCCTCGTGCC GCACCCCTTC
CCCTGA
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| Protein sequence | MTGTAAAYPT PLAAAAAHLR QHLHRRWLAQ PFGRAPRVVT LGDVDVPAAA DPDRCDATVH
LTAATVLIGP IGSAAGRACG HCLAIRWQRL RTRSQRDALE VGGQTTAVGP WPQLTTYHLD
AAWELHRASH TSPPPPPPPS WDRHSTPLPR ISQLDLASLR VRTYPVLAEP CCPSCTRQRP
DTPDPLVLAH HPRPKPRPDA YRLSAPDGYP LPAAALVNPV CGVLGAGTAL TITSPTTAPV
TGSVFIRGYG GLLDVSWSGQ SSGYDASRSL AYLEGLERYA GTHRRRNVTP VIAAYADLGP
DALHPDRCGR HPDEVYDTDP ILRRFDPQRP IPWVWGQNLH TGKPVLVPRR LCFYSSPAAG
DTFVLSSSSG CATGSCREEA ALFGLLELIE RDAFLLAWYG NLTLPRIDLD TCPPVVRALV
DRAELQGYRL YAFDNRIDLD VPVVTSLAVR HDGGPGLLSF AAAAHVDPQQ AVTGALAEAL
TYIPHQPATV RRRRAELERM ADDYTLVRRL PDHSALFGLP RMAVHAGSYL NDRGALPIEQ
VFAGYRTPGT PDLRDDLRRV LDLLSARGLE AIMVDQTTPE QEAIGLRSVC TVVPGLLPID
FGWIRQRAPH LPRLRTAPAV AGLVDAELTD ADLRLVPHPF P
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