| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2419 |
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| Symbol | |
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| ID | 5058882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2715458 |
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| End bp | 2716198 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640474678 |
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| Product | regulatory protein, MerR |
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| Protein accession | YP_001159244 |
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| Protein GI | 145594947 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.110485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAGCG GCGAACTCGC CCGGCTGGCC GGAGTCAGCG TCCGCACCCT GCGGCACTAC
CACCAGGTTG GGGTCCTTCC CGAGCCGGCA CGGCGGGCGA ACGGCTATCG CGAGTACACG
GTGCGCGACC TGGTGCTGCT GCTGCGCATC CGGCGGCTGG CCGAGATCGG CATCCCCCTC
GACGACATTC CGCCGATACT GGGGGCCAGC GGCCGGGCCC ACGCTGTCCT CGACGAGCTC
GACCGCGAAC TGGCCGACCA GATCGATCGG CTCACCGCCC GCCGCGAGGT GATCGCCCAG
CTTCGCGCCG CCGGAGCCGC CGCGGACACG CCGCCGGAAC TGGCCGGCCT GCTCGCGAGC
ATTGGCAGCG GCGGCGATCC GGACCTGCCG CCAGAGATAC TCAAACACGA CCACGAGGTA
ATCTTGCTGC TGCACCACCT CCTGGACACC AGGGGCCGGG CCGCGTTGAT CGGGCTGCTC
AGTCAGATCA CCGAGCCGGA CGTGCTGGCG GCCACCACCG CGCTGACCGC CCGGTTCGCC
GCGCTCGGGC CGGACACCGG CGATGAGGAG ATCGACCGGC TGGTCGCCGA CTACCACCTC
GCTCTGGACC AGCTGAGCGT CGACGGGTGG ACGGAGTCGG ATCCGCGGAC CCGTGCGCTG
CTCATGTCGT ACCAGGAAAT GGCTTTCAAC GACGCCCAGC GTGAGCTTCT CGCCCGGCTG
GCCAATCTCG ATCAGCCGTG A
|
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| Protein sequence | MNSGELARLA GVSVRTLRHY HQVGVLPEPA RRANGYREYT VRDLVLLLRI RRLAEIGIPL
DDIPPILGAS GRAHAVLDEL DRELADQIDR LTARREVIAQ LRAAGAAADT PPELAGLLAS
IGSGGDPDLP PEILKHDHEV ILLLHHLLDT RGRAALIGLL SQITEPDVLA ATTALTARFA
ALGPDTGDEE IDRLVADYHL ALDQLSVDGW TESDPRTRAL LMSYQEMAFN DAQRELLARL
ANLDQP
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