Gene Strop_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2418 
Symbol 
ID5058881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2714459 
End bp2715187 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content70% 
IMG OID640474677 
Producthypothetical protein 
Protein accessionYP_001159243 
Protein GI145594946 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.206237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGGCT TCGCTGCTCT TCACCGCACC GGTGACCCAC TCGTGCTGCC GAATGTGTGG 
GACGTGGCCT CCGCCCGTGG CCTGGTCGAG GCGGGATTTC CCGCGCTCGG CACGACCAGC
CTCGGTGTCG CCGCCGCAGC CGGCCTGCCC GACGGTACCG ATGCCGCACT CGGTGAGACA
CTGCGCCTCA CGCGAAGCCT GGCGGCGCTG CCCGTTCACC TCACCGTCGA CATCGAAACT
GGTTCGGTCG ACACCGCGGC CGCCGTGGCC GACGCCGGTG CGGCGGGCGT GAACATGGAA
GACGCCATGT GTCCGGCCGA GACACACGCG GCGCTCATCC GATCCGTGAA GCGCGAGGTT
CCACACCTGT TTGTGAATGC CAGGACCGAC ACCTACTGGC AACGCGCTGG CGACCTGGCC
GAAACGCTGC GCCGGGTGCG GCTCTACGCC GACGCCGGTG CCGACGGAGT GTTCATCCCC
GGGCTGGCGG GGCCCGCCGA CATCGCCGCG GTCGTGGCGG CGGTCGAGGT GCCGGTCAAC
GTCCTGTTCC TGCCTGGCCG ACACACCGTC GTCACCCTGG CTGGCCTGGG CGTGGGACGG
ATCAGCACCG GCTCGCTACT CTTCCGCGCC GCCCTGGCCG CATCGGTGGA AACAGCCGTA
GCCGTCCGCG ACGGCCATAC CGTGCGACGG GACCTACCGT CCTACGCGAA GATCAATGCC
TGGTCGTAG
 
Protein sequence
MRGFAALHRT GDPLVLPNVW DVASARGLVE AGFPALGTTS LGVAAAAGLP DGTDAALGET 
LRLTRSLAAL PVHLTVDIET GSVDTAAAVA DAGAAGVNME DAMCPAETHA ALIRSVKREV
PHLFVNARTD TYWQRAGDLA ETLRRVRLYA DAGADGVFIP GLAGPADIAA VVAAVEVPVN
VLFLPGRHTV VTLAGLGVGR ISTGSLLFRA ALAASVETAV AVRDGHTVRR DLPSYAKINA
WS