Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2402 |
Symbol | |
ID | 5058865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2696690 |
End bp | 2697745 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640474661 |
Product | ABC transporter related |
Protein accession | YP_001159227 |
Protein GI | 145594930 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACGATG CCGGTCTGAC CCACGATGCC GGACTGACGC TGGACGGGGT GAGCGCCGCC TACCGGGGCG TCACCGTCCT GCAGCAGATG CGGTTGACCA TGGCCCGGGG GGAACTCCTG GTGGTACTCG GCCCCTCCGG CGCCGGCAAG TCGACGCTGT TGCGGGTGGT GGCCGGCCTG GAGCCGGTCA CCACCGGGCG AGTCTGGATC GCCGGTCGGG ATGTCACCGC CGACCGTCCC GGCCGGCGCA ACGTGTCGAT GGTCTTCCAG TCGTACGCGC TCTTCCCTCA CCTGACCGTC GCCGAGAACA TCGCGTTCGG CCTGGTGGTG CGGGATGTCC CGAAGACGGC GGCCCGAGAG CGGGCCCGGT CCGCCGCCGA GCAGGTCGGT GCGGCGCACC TGCTCGACCG GCGGCCCGGG CAGCTCTCCG GCGGTGAGCG GCAGCGGGTC GCGTTGGCCC GGGCGTTGGT GCGGGAGCCG GACGTGTTCC TGCTCGACGA GCCGCTGTCC AACCTCGACC TTGCGCTGCG GGTGCAGATG CGGGCCGAGC TACGGGCCCT GCACGATCGG CTCGGTGCCA CGATGGTGCA CGTCACGCAC GATCAAACCG AGGCGTTGGT GCTGGCCGAC CGGATCGCGG TGCTGCGTGA CGGCCGGGTG GAGCAGGTCG GTACGCCGGA CGAGATCTGG CACACCCCGG CGAGCCGGTT CGTGGCGGGC TTCGTCGGCT CTCCAGCGAT GAACGTGCTT CCCAGTTCCG GCCCAATCCA CCCATCCGGT GCCCCGCCGA CGGGGGTGTC CGGCGACCGG GAGATCGGGT TTCGCCCGGA GGCGGTGGTG TTGGGGGCGT CCGACGGGGT GGCGGCGACC GTTGACCGGG TTGAGGTGGT CGGCACGGAC GCCTACGCCT ACCTCACCCT CCTTGCCGGG TGCCCGGTGG TGGCCCGGGT GCCCGCCGCC CACCGGCCCG CGCGCGGCGA TACGGTCCGA GTCGGGGTCC GCTGGGCCGA TACGCACGTC TTCGACGCCG ACACCGGCCT CCGGTGTGCC CCTTGA
|
Protein sequence | MNDAGLTHDA GLTLDGVSAA YRGVTVLQQM RLTMARGELL VVLGPSGAGK STLLRVVAGL EPVTTGRVWI AGRDVTADRP GRRNVSMVFQ SYALFPHLTV AENIAFGLVV RDVPKTAARE RARSAAEQVG AAHLLDRRPG QLSGGERQRV ALARALVREP DVFLLDEPLS NLDLALRVQM RAELRALHDR LGATMVHVTH DQTEALVLAD RIAVLRDGRV EQVGTPDEIW HTPASRFVAG FVGSPAMNVL PSSGPIHPSG APPTGVSGDR EIGFRPEAVV LGASDGVAAT VDRVEVVGTD AYAYLTLLAG CPVVARVPAA HRPARGDTVR VGVRWADTHV FDADTGLRCA P
|
| |