Gene Strop_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2402 
Symbol 
ID5058865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2696690 
End bp2697745 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content72% 
IMG OID640474661 
ProductABC transporter related 
Protein accessionYP_001159227 
Protein GI145594930 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGATG CCGGTCTGAC CCACGATGCC GGACTGACGC TGGACGGGGT GAGCGCCGCC 
TACCGGGGCG TCACCGTCCT GCAGCAGATG CGGTTGACCA TGGCCCGGGG GGAACTCCTG
GTGGTACTCG GCCCCTCCGG CGCCGGCAAG TCGACGCTGT TGCGGGTGGT GGCCGGCCTG
GAGCCGGTCA CCACCGGGCG AGTCTGGATC GCCGGTCGGG ATGTCACCGC CGACCGTCCC
GGCCGGCGCA ACGTGTCGAT GGTCTTCCAG TCGTACGCGC TCTTCCCTCA CCTGACCGTC
GCCGAGAACA TCGCGTTCGG CCTGGTGGTG CGGGATGTCC CGAAGACGGC GGCCCGAGAG
CGGGCCCGGT CCGCCGCCGA GCAGGTCGGT GCGGCGCACC TGCTCGACCG GCGGCCCGGG
CAGCTCTCCG GCGGTGAGCG GCAGCGGGTC GCGTTGGCCC GGGCGTTGGT GCGGGAGCCG
GACGTGTTCC TGCTCGACGA GCCGCTGTCC AACCTCGACC TTGCGCTGCG GGTGCAGATG
CGGGCCGAGC TACGGGCCCT GCACGATCGG CTCGGTGCCA CGATGGTGCA CGTCACGCAC
GATCAAACCG AGGCGTTGGT GCTGGCCGAC CGGATCGCGG TGCTGCGTGA CGGCCGGGTG
GAGCAGGTCG GTACGCCGGA CGAGATCTGG CACACCCCGG CGAGCCGGTT CGTGGCGGGC
TTCGTCGGCT CTCCAGCGAT GAACGTGCTT CCCAGTTCCG GCCCAATCCA CCCATCCGGT
GCCCCGCCGA CGGGGGTGTC CGGCGACCGG GAGATCGGGT TTCGCCCGGA GGCGGTGGTG
TTGGGGGCGT CCGACGGGGT GGCGGCGACC GTTGACCGGG TTGAGGTGGT CGGCACGGAC
GCCTACGCCT ACCTCACCCT CCTTGCCGGG TGCCCGGTGG TGGCCCGGGT GCCCGCCGCC
CACCGGCCCG CGCGCGGCGA TACGGTCCGA GTCGGGGTCC GCTGGGCCGA TACGCACGTC
TTCGACGCCG ACACCGGCCT CCGGTGTGCC CCTTGA
 
Protein sequence
MNDAGLTHDA GLTLDGVSAA YRGVTVLQQM RLTMARGELL VVLGPSGAGK STLLRVVAGL 
EPVTTGRVWI AGRDVTADRP GRRNVSMVFQ SYALFPHLTV AENIAFGLVV RDVPKTAARE
RARSAAEQVG AAHLLDRRPG QLSGGERQRV ALARALVREP DVFLLDEPLS NLDLALRVQM
RAELRALHDR LGATMVHVTH DQTEALVLAD RIAVLRDGRV EQVGTPDEIW HTPASRFVAG
FVGSPAMNVL PSSGPIHPSG APPTGVSGDR EIGFRPEAVV LGASDGVAAT VDRVEVVGTD
AYAYLTLLAG CPVVARVPAA HRPARGDTVR VGVRWADTHV FDADTGLRCA P